Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 863 a.a., Transcriptional regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

 Score =  180 bits (456), Expect = 4e-49
 Identities = 223/899 (24%), Positives = 374/899 (41%), Gaps = 76/899 (8%)

Query: 53  LVLFRSPAGYGKTTMAAQWLADKP---NLGWYSIDDSDNDPFRFMNYLLQAINKATHNAC 109
           L+L  +PAG+GK+++A ++    P      W  +   DNDP RF+  LL+ +        
Sbjct: 1   LLLVSAPAGFGKSSLAVEFCQSLPAHWQSLWLGLSARDNDPGRFLERLLEGLQAFFPQLG 60

Query: 110 PNAQKLAEKRQFSS-------LHSLFSEVFAEMADYHGECYVVLDDYHLIHDETIHEAMR 162
             A  L + RQ          L  L  E+   ++  H    +VLDDYHL     +   ++
Sbjct: 61  GRALGLLKMRQRHQPFAFEEWLDGLLDELSTHLSP-HEPLLLVLDDYHLAQSPVLDRCLQ 119

Query: 163 FFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEIGNELLAFDTEETTRFFNQRVSDGI 222
           FFL H+PD L ++VTSR  P    A LR+   ++E+  + L    EE      Q  S  +
Sbjct: 120 FFLNHLPDGLLVLVTSRQRPDWHLARLRLSRQLLELNEQDLRLTHEEALTLL-QHHSSSL 178

Query: 223 DALTANHLRDYVEGWPSAMQ--LIALQAQHQHRTLAQTIESVSHFNHAHLWDYLVEEVFD 280
                 +L    EGW + ++  L+A         L Q +    H     + DYL+EEV D
Sbjct: 179 RGEALENLIQRSEGWVAGLRFWLLAASEAGTEGLLPQAL----HGGEGLIRDYLLEEVID 234

Query: 281 LLDDETRYFLMQCSVLDHFDDALVSSLTGRDDALAMIESLNRFGLFISPLEGETNWYRFH 340
            L  E + FL   +  + F   L  ++    D+  ++  L    +F+ PL+   +WYR+H
Sbjct: 235 CLPAEVQAFLYDTAPQERFCSELCDAVREAHDSAEILRYLAAHQVFLVPLDEHGHWYRYH 294

Query: 341 NLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEA-----AAPHQALRHAHLAQDTELLASI 395
           +LF++ L  +  A        L   A + W  A      A  QALR  HL     L+ ++
Sbjct: 295 HLFSDLLRSRPSAPAMVPAATLHLRACR-WFNAQGLIDEAVEQALRAGHLDVAANLVQNL 353

Query: 396 LSQYGWKMFNQGELEVLEAAINQLSPPQLYREPKLCMLQAWLAQSQHRYNDVGALLAKAA 455
             +   ++  +  + +L      L    L   P+L +L +W      + +    L A  +
Sbjct: 354 SEE---QLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAAEELAAHLS 410

Query: 456 KEMKALNVELSTKEQGEFNALRAQVAINQNEPEKALELAELALSQLDHTTYRSRIVATSV 515
           + + A +         ++ AL   VA  + + E  +     AL  L    Y  R++  S 
Sbjct: 411 RFLPAPSATAQKSMLAQWLALSGIVARGRGDRETTVRYCSEALESLPQKRYGQRLMCLST 470

Query: 516 VGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWALLQQSEILLAQGYV-QAAYEVQD 574
           +  +    G L RA ++ + + +LA++         A   ++ +L A+G + +A  EV  
Sbjct: 471 LSNLAIADGDLWRARNLNRDSLELAQRVGNPLFEALAHYDRARVLQARGEILRALDEVHQ 530

Query: 575 NAFKL--IEEQQLHQVP----LHE-FLLRIRAQILWCWNRLDE--AEQAAYKGLSVLENH 625
              +L  +  Q+L+ V     ++E FLL +R Q      RL     E  A + +SVL  H
Sbjct: 531 GLQRLHKLSPQRLYAVRARLIMYEGFLLTLRMQPQAGLARLQAGLTEARACRDISVLIGH 590

Query: 626 SQSKHLHCYSMLARIAIGRGELDKAGRF-----IEQIQHLLKQSTYHVD-WTANASLSLL 679
                +  YS     A    EL +A R      +  I +L   +    + W A     L 
Sbjct: 591 CVIARIEGYS--GEFARAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLAQGRTDLA 648

Query: 680 LYWQVKENSTEIRQWLQSSTRPDKACNHFSQLQWRNIARAQIQLGELSEARHTLDFIQEQ 739
             W  +   T   +  +++  P+        ++ +      I+ G+   A+  LD + E 
Sbjct: 649 EAWLARLGQTYTGE--RAAAPPEFHPQLPLHVELQQAVLESIR-GQPILAQGRLDALLEH 705

Query: 740 AQE--YQLVTDTNRNLIVEALLAITEGDDLQACHKLKQALRLTNQTGMIGNF-LIDGSKI 796
            Q+   Q+++    N  V  LL+I  G + +A   L QA    +  G++  F  + G   
Sbjct: 706 GQQSGRQMLSVMALNQKVALLLSI--GREAEARRTLAQAFEAAS-GGVLQPFEWLFGEHR 762

Query: 797 GHLLEKLVHKGELGDLERHRAHLLLKEISTTQRSRSIHFDEEFVEKLVNHPNIPELVRTS 856
             L E+L+           R HLL +  ST  +                 P  P      
Sbjct: 763 EWLREQLLQ----APPSTLREHLLERLPSTVAQPAD--------------PAAP----VE 800

Query: 857 PLTQREWQVLGLIYSGFSNEQIAHELDVAGTTIKTHIRNLYQKLNIANRKEAVQTAEQL 915
            L+ RE  VL LI  G SN++I+ +L ++  T+KTH  ++  KL +  R +AV  A+ L
Sbjct: 801 TLSSRERAVLQLIAQGCSNQEISEQLFISLHTVKTHASHINSKLGVERRTQAVARAKAL 859