Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 891 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Pseudomonas fluorescens FW300-N2E2

 Score =  236 bits (603), Expect = 4e-66
 Identities = 223/913 (24%), Positives = 403/913 (44%), Gaps = 60/913 (6%)

Query: 24  SKLTRPGRLHNAIVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLA----DKPNLG 79
           +K+T P   H  + R  +LD    A   + VL  +PAG+GKTT   Q LA     +    
Sbjct: 14  AKVTPPATSHFEVPRQAMLDRAGQAETSRAVLVHAPAGFGKTTFMTQLLARYRQQRMTTV 73

Query: 80  WYSIDDSDNDPFRFMNYLLQAINKATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMADYH 139
           W ++D  DND  RF++    AI     +A    Q L + R       L + +  ++  + 
Sbjct: 74  WLTLDAGDNDVSRFLSGFATAIAGLQPDA--PQQDLGQLRNTD----LVAWILDQIGTHQ 127

Query: 140 GECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEIG 199
               +  DD+  I +  +   +   ++ +P    LV+ SR+ P +G A LR R  + EI 
Sbjct: 128 TPLAIFFDDFEAIRNPVVLGLVARGIEAIPHKTCLVIGSRTLPDIGLARLRARGSLTEID 187

Query: 200 NELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQLIALQAQHQHRTLAQTI 259
              L F  EET  F  QR   G+ +     L+   EGW +A+ L +L A   H    + +
Sbjct: 188 AASLRFSVEETQDFLTQRRGVGLSSTQVERLQCSTEGWVTALWLASL-ALENHGDTDKFL 246

Query: 260 ESVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTGRDDALAMIES 319
           +S S  N A +  YL E+V   L +  R FL++ S+LD    AL +++    D+L M+  
Sbjct: 247 DSFSGSNAA-IAAYLAEDVLAALPEPLRLFLLRSSLLDELSPALCNAICDCSDSLDMLRE 305

Query: 320 LNRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEAAAPHQA 379
           L R  LF+ PL+ + + YR+H+LF +FL HQ Q R  ++   L  AA  A+L       A
Sbjct: 306 LERHQLFLVPLDEQRDLYRYHSLFLDFLRHQMQRRYNEELPALHLAACNAYLAQGRVIPA 365

Query: 380 LRHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQLYREPKLCMLQAWLAQ 439
           +RHA    +T++   +L Q+   + +QG L +L   I QL   +L R P+L +++AW   
Sbjct: 366 IRHALQCGNTQIAIDLLHQHVDMLLSQGRLRLLAECIGQLPKAELQRHPRLQLIRAWCTA 425

Query: 440 SQHRYNDVGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQNEPEKALELAELALS 499
                 +   L+A            LS +      ALR  + +  ++ E+A E+   +L+
Sbjct: 426 FTWGPKEALTLVADIDSS------TLSGESAAYLLALRPMLLVMMDQSEQAYEMGTQSLA 479

Query: 500 QLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWALLQQSEI 559
           Q+      +  +    + + + +LG    A   + +  +   Q        + L + +E 
Sbjct: 480 QVTTAYPFAWAMLNQALTQTSILLGRHQEAHQYVDEARR--AQSDSAGAFGFVLAESAEA 537

Query: 560 LL--AQGYVQAAYEVQDNAFKLIEEQQLHQVPLHEFLLRIRAQILWCWNRLDEAEQAAYK 617
           LL    G ++ A      A  ++E  +      +       A+ L+  +  +EA +    
Sbjct: 538 LLDMMAGRLKQATARLRLATTMLEGSRRRDRNGNALAAVQLAETLYESDECEEALRLLLI 597

Query: 618 GLSVLENHSQSKHL-HCYSMLARIAIGRGELDKAGRFIEQIQHL-LKQSTYHVDWTANAS 675
              ++++   S  L   +++LARIA  +G+ D+A + + +++++  +     V  +A   
Sbjct: 598 YTPLVQDLGLSDGLITAHTLLARIADDKGDRDRALQMLSELENVGHRLGLPRVSASARLE 657

Query: 676 LSLLLYWQVKEN--------STEIRQWLQSSTR----PDKACNHFSQLQWRNIARAQIQL 723
            ++       +N        + +   W +++T      D       +L+W       I+ 
Sbjct: 658 RAMQTLAHGDQNGALEQLALAEQTFPWTETATHWGIANDTLTPTICRLRW------MIRS 711

Query: 724 GELSEARHTLDFIQEQAQEYQLVTDTNRNLIVEALLAITEGDDLQACHKLKQALRLTNQT 783
           G   +A   L     +A+  Q      +  I+ A     +     A   L++AL+     
Sbjct: 712 GASGKAIAPLRSELAEAERLQRGRRALKLRILLAEALYRDNQAKMALRTLERALKFAQTE 771

Query: 784 GMIGNFLIDGSKIGHLLEKLVHKGELGD-LERHRAHLLLKEISTTQRSRSIHFDEEFVEK 842
           G +  FL +G+ +  +L +L ++ E  D  +       L+  +T Q +   +        
Sbjct: 772 GFVRTFLEEGATVQIMLRELHNEREDKDATDDSSLERWLRSSATAQPAAGSNG------- 824

Query: 843 LVNHPNIPELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTTIKTHIRNLYQKLNI 902
                         PLTQ+E +VL L+  G SN  +A +L V+ +T++TH+RN+  KL+ 
Sbjct: 825 ----------TLVDPLTQKELKVLNLLGQGLSNAAMAEKLFVSDSTVRTHLRNINLKLHA 874

Query: 903 ANRKEAVQTAEQL 915
           ++R +A+  A ++
Sbjct: 875 SSRTQAIAIARRM 887