Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 936 a.a., ATP-dependent transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  578 bits (1490), Expect = e-169
 Identities = 351/907 (38%), Positives = 514/907 (56%), Gaps = 21/907 (2%)

Query: 22  IPSKLTRPGRLHNAIVRPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWL-ADKPNLGW 80
           IP+KL  P      + RPR+ +        +L +  + +G+GKTT+AAQW  A    + W
Sbjct: 33  IPTKLAIPMLPPGLLERPRLDEWQLRLPQVRLAVLHAASGFGKTTLAAQWARAFDGRVAW 92

Query: 81  YSIDDSDNDPFRFMNYLLQAINKATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMADYHG 140
             +  SDN   +F  YL QA+++     CP A  LAE+ Q S L +LF+++ AE+   H 
Sbjct: 93  LQLHASDNLALQFGRYLTQALDRQLDAGCPLAAALAEQGQVS-LDALFTQLLAELPGEHE 151

Query: 141 ECYVVLDDYHLIHDETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEIGN 200
              +VLD++ ++H+  +   +RFFL+HMP  +TL+V SR  P LG A LRV+  ++ +  
Sbjct: 152 AILIVLDEFEVLHERELIAGLRFFLRHMPCWMTLLVCSRRLPELGVAELRVKHQLLLLDA 211

Query: 201 ELLAFDTEETTRFFNQRVSDGIDALTANHLRDYVEGWPSAMQLIALQAQHQHRTLAQTIE 260
             LAF+ +E        V   I+      L   + GWP A+QL ALQ     R +   +E
Sbjct: 212 RQLAFEDDEVQALLQLGVPVNINREQVERLNRRIGGWPCALQL-ALQEVQTSRGMDSFLE 270

Query: 261 SVSHFNHAHLWDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSLTGRDDALAMIESL 320
           ++    H  + DY+ E+V D L ++ R FL    +L+ FD AL   LT       M+E L
Sbjct: 271 NLL-LGHPDIRDYMREQVIDGLPEDLRGFLEATCLLERFDAALADRLTEACHGREMLERL 329

Query: 321 NRFGLFISPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEAAAPHQAL 380
            R GLFI PL+    WY +H LFA FL  + +   PQ+   L   AA+A L    P +A 
Sbjct: 330 ERGGLFIQPLDSLRRWYSYHPLFAVFLQGELRTHQPQRVNQLHLRAAEALLSENLPEEAA 389

Query: 381 RHAHLAQDTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQLYREPKLCMLQAWLAQS 440
           RHA  A D + +A IL ++G   + QG+L +L+  +  L    +   P L +LQAW++Q+
Sbjct: 390 RHAVQAGDPQQVAEILQRHGRAFYRQGQLGLLQQCLETLPETVIAGSPLLTLLQAWVSQN 449

Query: 441 QHRYNDVGALLAKAAKEMKALNVELSTKEQG------EFNALRAQVAINQNEPEKALELA 494
            +++  V     KAA+    L ++ S  EQ       EFNA+RAQVA+NQ + ++A+ LA
Sbjct: 450 SYQFEHVERWF-KAAE----LALQRSCSEQDWERIVCEFNAVRAQVAMNQGDEQRAITLA 504

Query: 495 ELALSQLDHTTYRSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWALL 554
           + AL+        SR+ A S + EV+ V G L +A    ++ E+ AR+    H  +W+L 
Sbjct: 505 QEALTCEPLIMRTSRVAAMSGLAEVHFVQGALPQAQKQYEEAERRAREINASHLVVWSLG 564

Query: 555 QQSEILLAQGYVQAAYEVQDNAFKLIEEQQLHQVPLHEFLLRIRAQILWCWNRLDEAEQA 614
           Q SEI +AQG++Q AY +Q+ A + IE+Q L   P+ EF+ R+R Q+L  W++LD AEQ 
Sbjct: 565 QLSEIAIAQGHLQKAYTLQERAIQYIEQQHLRATPIVEFIYRVRGQVLLEWHQLDAAEQC 624

Query: 615 AYKGLSVL-ENHSQSKHLHCYSMLARIAIGRGELDKAGRFIEQIQHLLKQSTYHVDWTAN 673
           A +G+ +L E   Q   L  +++LA +A  RG+      +I Q+Q +L    YH+DW AN
Sbjct: 625 ALQGIQILDELGDQRWRLQSHTLLAGVAYARGQQSACADYIGQMQTMLADDRYHIDWLAN 684

Query: 674 ASLSLLLYWQVKENSTEIRQWLQSSTRPDKACNHFSQLQWRNIARAQIQLGELSEARHTL 733
           A   +L YW   ++   IRQWL S+       NHFSQL  RN ARA + LG+L  A   L
Sbjct: 685 AHAVMLAYWDSSQDREAIRQWLLSAPPVSAGANHFSQLNARNHARAHVTLGQLDSALPIL 744

Query: 734 DFIQEQAQEYQLVTDTNRNLIVEALLAITEGDDLQACHKLKQALRLTNQTGMIGNFLIDG 793
             +   A+ + LV D NRN I+ A L     +  QA   L++A+ L + +G IG+FL  G
Sbjct: 745 RQLLTDAERHGLVMDRNRNHILLAQLHWLREERQQALDHLQRAMTLASGSGAIGSFLRVG 804

Query: 794 SKIGHLLEKLVHKGELGDLERHRAHLLLKEISTTQRSRS----IHFDEEFVEKLVNHPNI 849
             I  +L+ L+H+  L + E  RA  L+ +++  QR  S    I  DE  ++ ++N P++
Sbjct: 805 KPIIGMLKSLLHERTLDEPEAQRATRLI-QLAQQQRDFSRAIRITLDEAVIQDIINRPDV 863

Query: 850 PELVRTSPLTQREWQVLGLIYSGFSNEQIAHELDVAGTTIKTHIRNLYQKLNIANRKEAV 909
           PEL+R SPLT+REWQVL LI++G SNEQIA  L+VA TTIKTHIR+LYQKLNI +R EAV
Sbjct: 864 PELIRRSPLTRREWQVLSLIHAGQSNEQIADHLNVAPTTIKTHIRSLYQKLNITHRSEAV 923

Query: 910 QTAEQLL 916
           Q A  LL
Sbjct: 924 QLARDLL 930