Pairwise Alignments

Query, 921 a.a., HTH-type transcriptional regulator MalT from Vibrio cholerae E7946 ATCC 55056

Subject, 873 a.a., ATP-dependent transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  134 bits (338), Expect = 2e-35
 Identities = 216/930 (23%), Positives = 356/930 (38%), Gaps = 138/930 (14%)

Query: 38  RPRVLDLLQHATCYKLVLFRSPAGYGKTTMAAQWLADKPN---LGWYSIDDSDNDPFRFM 94
           RPR++  L    C +L L  +PAG+GK+ + ++     P    L W  +           
Sbjct: 33  RPRLVQALLDTDC-RLRLICAPAGFGKSVLMSECARLVPPGTCLVWLDLGGRMCTVHALY 91

Query: 95  NYLLQAINKATHNACPNAQKLAEKRQFSSLHSLFSEVFAEMADYHGECYVVLDDYHLIHD 154
             L  A+ +    AC                   S++   +       +++LDDY     
Sbjct: 92  EQLCTALGEP---ACKET-------------GTESDMLTLLRGVGQPLWIMLDDYPRDDC 135

Query: 155 ETIHEAMRFFLKHMPDNLTLVVTSRSTPPLGTANLRVRDLMIEIGNELLAFDTEETTRFF 214
             +   +   L   P  ++  V+SR  P      L ++  + E+  E LAF  EE  +  
Sbjct: 136 PELDACLDMLLDMGPAPVSWWVSSRRQPAWKLPRLLLQGHLFELEAEALAFTAEELDQIL 195

Query: 215 N-QRVSDGIDALTANHLRDYVEGWPSAMQLIALQAQHQ---HRTLAQTIESVSHFNHAHL 270
              R++  +   +   L+  +EGWP+ + L+ L A  Q    R +A T           L
Sbjct: 196 RVHRLT--LSPESFQQLQRGMEGWPAGVCLMLLNADEQALRERLVAGT---------PLL 244

Query: 271 WDYLVEEVFDLLDDETRYFLMQCSVLDHFDDALVSSL---TGRDDALAMIESLNRFGLFI 327
            DY+  EV   L DE R  L+  + +  F  AL   +    GR+    +++ L    LFI
Sbjct: 245 RDYVQREVMAGLTDEVRRALLALARMPRFSAALCDHVLDGIGRE----IVDVLKTRQLFI 300

Query: 328 SPLEGETNWYRFHNLFAEFLAHQRQARIPQQEQDLQRAAAKAWLEAAAPHQALRHAHLAQ 387
             ++    W+R     A+ L    +  +P Q   +   A + +       +A+ HA  A 
Sbjct: 301 RQIDNCGEWFRLWKPLAQMLQRSGENTVPTQ---VHLRACQWFASRGEMREAVEHALWAG 357

Query: 388 DTELLASILSQYGWKMFNQGELEVLEAAINQLSPPQLYRE-PKLCMLQAWLAQSQHRYND 446
             E+ A+ L +YG +    G+            P  L+    +L +LQ W      R ++
Sbjct: 358 QPEVAANYLQRYGQEQLLIGDNVSRFLKWRSELPQDLFASTTRLIVLQGWALIISARLDE 417

Query: 447 VGALLAKAAKEMKALNVELSTKEQGEFNALRAQVAINQNEPEKALELAELALSQLDHTTY 506
           V   LA+ AK     +     +   ++ ALR  +A  + EPE A +    AL  L    +
Sbjct: 418 VDDCLAELAKFFPQPDARRQAQLLAQWQALRGFLARLRGEPE-ARQNCLQALEVLSDHAW 476

Query: 507 RSRIVATSVVGEVNHVLGHLSRALSMMQQTEKLARQYQVYHQALWALLQQSEILLAQGYV 566
             R++   V+ +     G L  A     +  KLAR        +   + + ++L   G  
Sbjct: 477 AQRVLCYQVLTQQAMAEGELELAQQYNSEGMKLARLKGSVLYEVMLSVDRIQLLELTGEF 536

Query: 567 QAAYEVQDNAFKLIEEQQLHQVPLHEFLLRIRAQILWCWNRLDEAEQAAYK-GLSVLENH 625
           + A  V + A + + E   H  PL   L  ++  +L  +  LDE  Q AY+ G +  E  
Sbjct: 537 ERAVGVLNEALQALRESVRHS-PLIGRLQLLQGHLL-AYQGLDEPAQEAYQLGKAETETC 594

Query: 626 SQSKHLHCYSMLARIAIGRGELDKAGRFIEQIQHLLKQSTYHVDWTANASLSLLLYWQVK 685
             S     Y  LA +A    E   A               YH  W  +A           
Sbjct: 595 GDSYCFFGYVGLAELAARNHEFACA---------------YH--WLRDAE---------- 627

Query: 686 ENSTEIRQWLQSSTRPDKACNHFSQLQWRNI-----ARAQIQLGELSEARHTLDFIQEQA 740
                + QW            H  + ++R I       A +  GEL +AR  L  + E  
Sbjct: 628 ----RLSQW-----------RHVPEARFRGILPLINGVAWLHQGELRKARSALCQVLELY 672

Query: 741 QE---------YQLVTDTNRNLIVEALLAITEGDDLQACHKLKQALRLTNQTGMIG---- 787
           +          Y+L+    R L   A++ + +G   +A   L++ +    Q   +G    
Sbjct: 673 EGQGYLSPSGFYELLPRVRRYL---AVIDVLDGQPARAIAALREQVEQNLQAQRLGLACE 729

Query: 788 -NFLI------DGSKIGHLLEKLVHKGELGDLE--------RHRAHLLLKEISTTQRSRS 832
             F +      DG  +   LE  +  GE              HR    L  +    R  S
Sbjct: 730 CRFSLAEALHADGQAVEAELEVRLALGEAARQHLVKPLYELHHRQPQWLAAMLPALRGES 789

Query: 833 IHFDEEFVEKLVNHPNIPELVRTSP----LTQREWQVLGLIYSGFSNEQIAHELDVAGTT 888
           +       ++L+ +   PE+V  +P    L+ RE  VL LI  G SN++IA +L ++  T
Sbjct: 790 LR------QRLLRYEREPEVVLPAPDETVLSNRELTVLRLIAQGCSNQEIAEQLFISLHT 843

Query: 889 IKTHIRNLYQKLNIANRKEAVQTAEQLLQL 918
           +KTH R +  KL +A R +AV  A+ L  L
Sbjct: 844 VKTHARRINTKLGVARRTQAVAKAKALAWL 873