Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  223 bits (567), Expect = 2e-62
 Identities = 154/478 (32%), Positives = 248/478 (51%), Gaps = 38/478 (7%)

Query: 82  ILREIQFGQSGYIFGYDSKGTRLLLGK-------ATNGLGDNFMNMQDTQGNYLIQDLLK 134
           I+++I+ G++GY+   ++ GT L+  K       A   LGD +  +    G  L++    
Sbjct: 201 IVKQIKLGETGYLMLMENNGTVLVDPKQPEHNFKALGSLGDGYAQLAKA-GKGLVE---- 255

Query: 135 NAKLNQFTTYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGFYTDDVDAEIAEMEARAEEQ 194
             +LN         P EQ              W   IG    TD + +  A         
Sbjct: 256 -VELNGERYMANVWPSEQLG------------WTF-IGLIKQTDVMSSATALT------- 294

Query: 195 LEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGDADLTARMEKFSV 254
                + +A I  ++ +  +V+       I+RP+    + +   A G  DLT  ++    
Sbjct: 295 -----WLIAIIAAVLAVFFAVVGASFASLIVRPIRSVASGLEGIAQGQGDLTQNLQIRGS 349

Query: 255 PEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHLASNQREETEQVA 314
            E  +L++ FN+F+ +++++I+ +     +++  + + +Q ++ +   A  QRE  + V+
Sbjct: 350 DETAQLANWFNQFLAAIRSLIQHIGGAATKILANSQSATQVSSDMADAAGRQREAVDMVS 409

Query: 315 TAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQALAEEVADASSVIA 374
           TA  EM  TA E++ + + AA+SA   +  A +    ++AA  SV  L++E+  ++  + 
Sbjct: 410 TAFHEMVATANEVARSCSQAAESADSGQRQAREGQQQIDAAVHSVDKLSQEIEQSAQSMQ 469

Query: 375 KLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASRTQE 434
           +LE D N+I S L  I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT +
Sbjct: 470 QLERDSNDIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTAD 529

Query: 435 STQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKIQASIGTIMDMNAL 494
           ST +I  ++  L   +    + M +S + S  +V     A  +  +I+ S+  I DMN  
Sbjct: 530 STAEIDGLLGNLAKRTSQVTQQMHASLEVSQQSVSRIGEARNSFGQIRESVDVIRDMNTQ 589

Query: 495 IATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRAHELYELVARFK 552
           IATA EEQ  V ++I++ I  I   +   A+LAN  R  SQ+L G ++EL  LV RF+
Sbjct: 590 IATAAEEQHQVAEDINRHISQIHGDAQLVAELANSARLDSQSLAGLSNELDGLVRRFR 647