Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  360 bits (924), Expect = e-104
 Identities = 200/559 (35%), Positives = 339/559 (60%), Gaps = 8/559 (1%)

Query: 2   SLTIRQRLYILSLVPLLTIALSMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYLQI 61
           +L +R +L +L+L P+L +A+ +      E + L+++Q  +TR+++++ ++AELK Y+++
Sbjct: 27  NLRLRMKLLLLALGPILLLAILLSGIAVYELQSLAEQQEAHTRDSLIQDRRAELKHYVEL 86

Query: 62  ADTALAPLKARQAP-----LDDAIAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDN 116
           A  A+ P+  R A       D A+AIL  + +G+ GY +GYD++  R+L G   + +G +
Sbjct: 87  ARNAIGPIYERSAEGDMQARDQAVAILERLSYGKDGYFWGYDTQAVRILQGNTKDKIGQS 146

Query: 117 FMNMQDTQGNYLIQDLLKNAKL-NQFTTYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGF 175
           F + +D  G Y I++L++  +  +++  Y F        +PK+ Y+ +LP+W +  GT  
Sbjct: 147 FYDYRDPNGVYAIRELVRAGQDGSRYVDYSFVLGNSSELVPKVGYAEFLPKWKMVFGTSL 206

Query: 176 YTDDVDAEIAEMEARAEEQLEQGLYTLAGITLL-IVILVSVMAIMINRSIMRPLELFDNS 234
             D V+ ++    A  +++++ GL T+  ++   +++L++++AI ++ +++ PL L   +
Sbjct: 207 NLDGVERDVQAARAEFQKRID-GLVTIMLVSAFALLVLMALLAIFMSNALLSPLLLIKRN 265

Query: 235 ISSFASGDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQ 294
           +   A GD DLT R+   S  E  +L+ +FNRFVE + +++++V     Q+     A++ 
Sbjct: 266 LDDMAQGDGDLTQRLPITSQDELGELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVAS 325

Query: 295 RATQVDHLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNA 354
           +A + +   ++QR ET+QVATA+ EM+  A E++ +A  AA++A++ +        +V+ 
Sbjct: 326 QAQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQ 385

Query: 355 AARSVQALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQ 414
           + R +  L  E+  +   +  L+ DV  I   L VI+ IAEQTNLLALNAAIEAARAGE 
Sbjct: 386 SIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEA 445

Query: 415 GRGFAVVADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAA 474
           GRGFAVVADEVR LASRTQ+ST +I  MI +L++ +   V  M  + ++  +T  +AN A
Sbjct: 446 GRGFAVVADEVRALASRTQQSTGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQA 505

Query: 475 AEALQKIQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGS 534
            E+L  I A IGTI  MNA IA A EEQ+ V +EI++ +  I+D     A  A Q  Q S
Sbjct: 506 GESLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTS 565

Query: 535 QTLNGRAHELYELVARFKV 553
           + LNG A  L +LV +F++
Sbjct: 566 RELNGLAERLQKLVGQFRI 584