Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  243 bits (620), Expect = 2e-68
 Identities = 145/346 (41%), Positives = 208/346 (60%), Gaps = 1/346 (0%)

Query: 208 LIVILVSVMAIMINRSIMRPLELFDNSISSFASGDADLTARMEKFSVPEFHKLSHNFNRF 267
           +I +LV+++  MI R+I+ P+    N + S    D +LT R +     E  ++  +FN  
Sbjct: 276 VIAVLVAIVTFMIIRAIITPINNI-NQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEM 334

Query: 268 VESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHLASNQREETEQVATAMTEMTTTAQEI 327
           VES + +I++VN     + E    +S  ATQ       Q  ET+ VATA+TEM  T  EI
Sbjct: 335 VESFRALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEI 394

Query: 328 SNNANNAAQSAKDAEDNATDVHNIVNAAARSVQALAEEVADASSVIAKLEGDVNNITSSL 387
           + N   AA+ A     NA      V      +Q+LA+++ +++SV+A+LE D   I S L
Sbjct: 395 AKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVL 454

Query: 388 AVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASRTQESTQQIHTMIQQLK 447
            VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQEST++I  +IQ L+
Sbjct: 455 DVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQ 514

Query: 448 AGSDAAVKAMESSQQRSITTVREANAAAEALQKIQASIGTIMDMNALIATATEEQSIVGQ 507
           + + + V+ ME+SQ++   +  +A +A   L +I   +  IMDM+  IA A EEQS V  
Sbjct: 515 SRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAA 574

Query: 508 EISQRIVVISDQSSESADLANQNRQGSQTLNGRAHELYELVARFKV 553
           E+++ +VVI D + ES+  A  N + S  +  RA  L   V++F+V
Sbjct: 575 EVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRV 620