Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  234 bits (598), Expect = 5e-66
 Identities = 139/370 (37%), Positives = 209/370 (56%), Gaps = 9/370 (2%)

Query: 184 IAEMEARAEEQLEQG-LYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGD 242
           IA++E    E L    L    G+ +  V++ S   + +NR +M P+      +       
Sbjct: 172 IADLEREQVETLHSSSLKWFIGLAVFAVLITSFFGVWVNRGVMTPVTEIRQKLRQIRE-K 230

Query: 243 ADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHL 302
           +D+T     F   E   ++ + N  V  L+ I+K + +    + +  + +++   Q +  
Sbjct: 231 SDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDR 290

Query: 303 ASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQAL 362
              Q+ ETEQ ATAM EMT    E++ ++N+AA+SA++A+++A   ++IV  +  S+  L
Sbjct: 291 MFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVL 350

Query: 363 AEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVA 422
           A ++   ++VI +L  +  NI   L VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 351 ASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVA 410

Query: 423 DEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKIQ 482
           DEVR LA RT EST++I +MI+ L+ G  +AV +ME    +        NAA  ALQ I 
Sbjct: 411 DEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIV 470

Query: 483 ASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRAH 542
           AS+ +I  +N  IATA +EQS V + I+Q I+ ISD + ES   AN        L+   H
Sbjct: 471 ASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAAND-------LSEAVH 523

Query: 543 ELYELVARFK 552
           +L +L    +
Sbjct: 524 QLAQLAGHMR 533