Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  244 bits (624), Expect = 5e-69
 Identities = 149/368 (40%), Positives = 216/368 (58%), Gaps = 1/368 (0%)

Query: 186 EMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFASGDADL 245
           E + R  E  E  +     ITL+  I   V+ + INRS+M+P+      + +    D+DL
Sbjct: 175 EEKDRVAEIYESSISLFILITLVAAIASIVLGVWINRSVMKPINHIRTQLHTIQQ-DSDL 233

Query: 246 TARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVDHLASN 305
           T   E+ +  E   +S   N     L+ I+K V +    V +   A+++     +     
Sbjct: 234 TVTFEQLNKDELGLISTGLNDVFRHLRGILKGVAEAANSVSDSALALNEFTQISNARIQQ 293

Query: 306 QREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQALAEE 365
           Q+ ETEQ ATAM EMT T  E++ +   AA SA++A+  A + ++IV  +  S+QAL+ +
Sbjct: 294 QQAETEQTATAMNEMTATVNEVAQSTTAAADSARNADRFAANGNDIVQLSISSMQALSMQ 353

Query: 366 VADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 425
           +   S VI  L  +  +I S L+VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 354 IQSTSEVITHLSHESQHIGSVLSVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 413

Query: 426 RKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQKIQASI 485
           R LA RTQE+TQ+I TMI+ L++G + AV AM+   ++     ++ N A EALQ+I AS+
Sbjct: 414 RSLAQRTQEATQEIETMIETLQSGVNEAVTAMDVGIKQVDDANQQTNKAGEALQEIVASV 473

Query: 486 GTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGRAHELY 545
             I +MN  IATA EEQS V + I++ I+ ISD +S+S + A +       L   A  + 
Sbjct: 474 DNITEMNTHIATAAEEQSSVAESINRSIIAISDIASQSTESALELGHSIAQLTSLADSMR 533

Query: 546 ELVARFKV 553
           + V  F++
Sbjct: 534 QQVTTFRL 541