Pairwise Alignments

Query, 553 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  318 bits (815), Expect = 3e-91
 Identities = 191/553 (34%), Positives = 302/553 (54%), Gaps = 2/553 (0%)

Query: 2   SLTIRQRLYILSLVPLLTIALSMMYFTFSETRLLSQEQMRNTREAMMEMKQAELKSYLQI 61
           + ++R +L +L+L PL+   + +M  ++   +    +++   RE ++  ++ ++K   QI
Sbjct: 3   NFSLRNKLLLLALFPLILTFIVLMTVSYHVEQSALADEVTTFREKLIGERKTQIKEATQI 62

Query: 62  ADTALAPLKARQAPLDDAIAILREIQFGQSGYIFGYDSKGTRLLLGKATNGLGDNFMNMQ 121
           A   +   +       +    LR+I+FG SGY F YDS+G  L      N  G N ++M 
Sbjct: 63  A-AGIVQYQLSLKEQGNVNQALRDIRFGSSGYFFLYDSQGKNLFHAVMPNLEGQNKIDMT 121

Query: 122 DTQGNYLIQDLLKNAKLNQFT-TYYFPKPGEQTPLPKLSYSVYLPQWDLTIGTGFYTDDV 180
           D +G  +I  LL  AK      ++YF KP     + K+ YS+ +P  D  +GTG Y DD+
Sbjct: 122 DPRGTKIIVGLLNAAKNGDGNFSFYFQKPNTNEQIEKIGYSMMIPGTDWMLGTGAYIDDI 181

Query: 181 DAEIAEMEARAEEQLEQGLYTLAGITLLIVILVSVMAIMINRSIMRPLELFDNSISSFAS 240
           DA + +      EQ+    Y +  I LL+  + + + ++  + ++ P++   ++++  A 
Sbjct: 182 DAVVEDYRTTVTEQMIDKSYAILLIALLLAAITAPVILVTAQRMVTPIKNMADNLNDIAK 241

Query: 241 GDADLTARMEKFSVPEFHKLSHNFNRFVESLQNIIKRVNQVGQQVVEETNAMSQRATQVD 300
           G+ DLT R+      E  +L  +FN FV+ LQ II  V     +V    NA+  +   + 
Sbjct: 242 GEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVMS 301

Query: 301 HLASNQREETEQVATAMTEMTTTAQEISNNANNAAQSAKDAEDNATDVHNIVNAAARSVQ 360
               +   ET+QV TA+TEM+ TA E++ N    A++   A  +  +    V+A+   + 
Sbjct: 302 RQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEIS 361

Query: 361 ALAEEVADASSVIAKLEGDVNNITSSLAVIQDIAEQTNLLALNAAIEAARAGEQGRGFAV 420
           AL  ++ +A+S I  L      I S L+VI  IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 362 ALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAV 421

Query: 421 VADEVRKLASRTQESTQQIHTMIQQLKAGSDAAVKAMESSQQRSITTVREANAAAEALQK 480
           VADEVR LASRTQ ST +I+ M+ +L      AVK ME SQQ  I +V  + A +E+L  
Sbjct: 422 VADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLGS 481

Query: 481 IQASIGTIMDMNALIATATEEQSIVGQEISQRIVVISDQSSESADLANQNRQGSQTLNGR 540
           + +++  I DM+  IATA  EQS V +EI++ +  I +  +E    + +    SQT++  
Sbjct: 482 VTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQE 541

Query: 541 AHELYELVARFKV 553
              L +LV +FK+
Sbjct: 542 GLNLGKLVGQFKI 554