Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., FIG000859: hypothetical protein YebC from Pseudomonas fluorescens FW300-N2E2

 Score =  152 bits (385), Expect = 5e-42
 Identities = 90/220 (40%), Positives = 126/220 (57%), Gaps = 5/220 (2%)

Query: 21  KVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASGGAGED-Y 79
           K+++K+ +E+ V A+ GG DP  N  LR  + KA    +   +I++A+ + +G    D  
Sbjct: 23  KIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMSRDIIDRAIARGAGATEADNV 82

Query: 80  QPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDHQAVFQF 139
           +   YEG+GPGG +V+V+C+TDN NRT   VR  F K G  +GT G VA++F+ +    F
Sbjct: 83  EELTYEGYGPGGVAVMVECMTDNRNRTAAAVRHAFSKCGGNLGTDGSVAYLFERKGQISF 142

Query: 140 -QGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDLTLDVEEI 198
             G DE+A+ EA + ADA+   + HEDG   VF     F+ V+ AL EA      D  EI
Sbjct: 143 APGLDEDALTEAALEADADDV-VSHEDGSFDVFTSFASFYAVRNAL-EAAGFKPADA-EI 199

Query: 199 TFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNADI 238
              P     +  E AEK  K +DML+D DDVQ VY NADI
Sbjct: 200 VMQPTTSAELDLEGAEKVLKLIDMLEDLDDVQNVYSNADI 239