Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., Protein of unknown function DUF28 from Pseudomonas syringae pv. syringae B728a

 Score =  106 bits (265), Expect = 3e-28
 Identities = 78/239 (32%), Positives = 122/239 (51%), Gaps = 16/239 (6%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           MG  ++V+    A    AK + + K  KEI + A+  G DPDMN  LR ++ +AKK  +P
Sbjct: 1   MGAQWKVKHKEAAAN--AKGRTFGKLSKEIMIAAR-AGADPDMNSRLRLVVEQAKKASMP 57

Query: 61  AHVIEKALDKASGGAGE--DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTG 118
              +E+A+ K +G  GE  +++   YEGF P    VIV+CLTDN NRT  ++R  F K  
Sbjct: 58  RETLERAIKKGAGLLGESVNFERLTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRK-- 115

Query: 119 AKIGTPGVVAHMFDHQAVFQFQGDDEEAILEALMMADAEVTDIE-HEDGVITVFAPNTEF 177
            ++G  G V+  F +Q + +      +A  E L   +A   D E  E+G       +T+ 
Sbjct: 116 GQLGAAGSVSWDFLYQGMIEAVPAAADADPE-LAAIEAGAQDFEPGEEGATLFLTESTDM 174

Query: 178 FKVKTALNEAFPDLTLDVEEITFVPQNRTVVSG---EDAEKFQKFLDMLDDCDDVQQVY 233
                A+ +A P+    V+      + ++ V G   E   + + FL+ +D+ DDVQ VY
Sbjct: 175 ----DAVCKALPEFGFTVQSAQLGYRPKSTVDGLTDEQMAEVEAFLEAIDNHDDVQNVY 229