Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Protein of unknown function DUF28 from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (390), Expect = 1e-42
 Identities = 89/222 (40%), Positives = 130/222 (58%), Gaps = 5/222 (2%)

Query: 19  KIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASGGA-GE 77
           K K+++K+ +E+ V A+ GG DP  N  LR  + KA    +    I++A+ +  G + G+
Sbjct: 21  KGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMTRDTIDRAVARGVGASDGD 80

Query: 78  DYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDHQAVF 137
           D +   YEG+GPGG +++V+ +TDN NRT   VR  F K G  +GT G VA++FD +   
Sbjct: 81  DVEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKCGGNLGTDGSVAYLFDRKGQI 140

Query: 138 QF-QGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDLTLDVE 196
            F  G DE++++EA M ADA+   + +EDG I VF   + F+ V+ AL  A         
Sbjct: 141 SFAAGVDEDSLIEAAMEADADDV-VTNEDGSIDVFTSFSGFYAVRNALEAA--GFKAADA 197

Query: 197 EITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNADI 238
           EI  +P    V+  E AEK  K +DML+D DDVQ VY NA+I
Sbjct: 198 EIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVYSNAEI 239