Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., YebC/PmpR family DNA-binding transcriptional regulator from Parabacteroides merdae CL09T00C40

 Score =  143 bits (361), Expect = 3e-39
 Identities = 78/236 (33%), Positives = 130/236 (55%), Gaps = 3/236 (1%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           MGR+FE RKA   K  G   +V++K GKEI + AK GG +P+ N  LR L+  AKK+ +P
Sbjct: 1   MGRAFEFRKARKFKRWGNMARVFTKLGKEITIAAKQGGPEPENNPRLRVLMQTAKKENMP 60

Query: 61  AHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAK 120
              +E+A+ +A      DY+   YEG+GP G ++ V+  TDN  RT  +VR  F K G  
Sbjct: 61  KDNVERAIKRAVSKDFTDYKEMNYEGYGPFGIAIFVETATDNTTRTVANVRSYFNKNGGS 120

Query: 121 IGTPGVVAHMFDHQAVFQFQGDDEEAILE-ALMMADAEVTDIEHEDGVITVFAPNTEFFK 179
           +GT G +  +F+H+ VF     D  ++ +  L + D  V +++ ++  + ++    +   
Sbjct: 121 LGTSGSLEFLFEHKCVFHIAKKDGMSLEDLELELIDYGVDEVDEDEDEVVLYGEFAQNSA 180

Query: 180 VKTALNEAFPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHN 235
           ++  L E   ++T    E   +P +   V+ E  E  +K ++ L++ +DVQ V+HN
Sbjct: 181 IQKYLEENGYEIT--SSEFVRIPNDVKEVTPEQRESIEKLIEKLEEDEDVQNVFHN 234