Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., DNA-binding regulatory protein, YebC/PmpR family from Phaeobacter inhibens DSM 17395

 Score =  143 bits (361), Expect = 3e-39
 Identities = 78/222 (35%), Positives = 118/222 (53%), Gaps = 2/222 (0%)

Query: 14  KTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASG 73
           +   A+ K++SK  KEI V AK G  DP+ N  LR  + +AK   VP  VI++A+ K++ 
Sbjct: 16  RQDAARSKLFSKLSKEITVAAKMGDPDPEKNPRLRLAVKEAKSQSVPKDVIDRAIKKSTA 75

Query: 74  GAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDH 133
           G G+DY+  RYEG+GP G +VIV+ +TDN NRT   VR  F K G  +G  G V  MFD 
Sbjct: 76  GEGDDYEEIRYEGYGPNGVAVIVEAMTDNRNRTASTVRSTFSKNGGNLGETGSVGFMFDR 135

Query: 134 QAVFQFQGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDLTL 193
           +    +     +A    +   DA   D++  +    ++  +T+  +V  AL     +   
Sbjct: 136 KGEVTYSATVGDADTVMMAAIDAGAEDVDSSEDGHVIYCADTDLNEVSNALEGELGE--S 193

Query: 194 DVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHN 235
           D  ++ + P   T +  E  +K  K +D L+D DDVQ+V  N
Sbjct: 194 DSTKLVWKPTTTTELDLEGMQKLMKLVDALEDDDDVQRVTTN 235