Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  355 bits (911), Expect = e-103
 Identities = 170/240 (70%), Positives = 200/240 (83%), Gaps = 1/240 (0%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           MGR+++ RK SMAKT G K ++YS+YGKE+YVCAKNGG DPD NL+LRH+ITKAKKDQVP
Sbjct: 1   MGRAYQNRKESMAKTAGQKTRLYSRYGKELYVCAKNGGFDPDGNLALRHMITKAKKDQVP 60

Query: 61  AHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAK 120
           AHVIE+AL+KA GG GEDY+ ARYEGFGPGG  VIVDCLTDNG RT+ +VRQ FVK  AK
Sbjct: 61  AHVIERALEKARGGGGEDYETARYEGFGPGGTMVIVDCLTDNGKRTFTEVRQAFVKNDAK 120

Query: 121 IGTPGVVAHMFDHQAVFQFQGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKV 180
           +G+PG V HMFDHQAVF F+G+DEEA+LEALMMAD +V DIE EDG+I+VFAPNTEF+K 
Sbjct: 121 LGSPGTVGHMFDHQAVFAFKGEDEEAVLEALMMADVDVADIEVEDGIISVFAPNTEFYKA 180

Query: 181 KTALNEAFPDLTLDVEEITFVPQNRT-VVSGEDAEKFQKFLDMLDDCDDVQQVYHNADIE 239
           KTALNEAFP+  L+VEEI FVPQ  T +   E   +F+KF   L+DCDDVQ VYHNADI+
Sbjct: 181 KTALNEAFPETELEVEEIAFVPQTMTELTDPEVIAQFEKFQAALEDCDDVQNVYHNADIK 240