Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding regulatory protein, YebC/PmpR family from Dechlorosoma suillum PS

 Score =  155 bits (393), Expect = 5e-43
 Identities = 93/218 (42%), Positives = 129/218 (59%), Gaps = 5/218 (2%)

Query: 21  KVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKALDKASGGA-GEDY 79
           KV++K  KEI V AK GG DP MN  LR  + KAK + +P   I+ A+ + +G   G  Y
Sbjct: 23  KVFTKLIKEITVAAKMGGGDPAMNPRLRLAMEKAKGESMPKDNIDNAIKRGTGQLEGVSY 82

Query: 80  QPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGVVAHMFDHQAVFQF 139
           +  RYEG+G GGA+V+VDCLTDN  RT  DVR  F K G  +GT G V+  F H     F
Sbjct: 83  EEIRYEGYGIGGAAVMVDCLTDNRVRTVADVRHAFNKYGGNMGTEGCVSFQFKHCGQMLF 142

Query: 140 -QGDDEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALNEAFPDLTLDVEEI 198
             G DE AI++A + A A+   I ++DG I V  P  +   V+ AL +A      ++ E+
Sbjct: 143 APGADEAAIMDAAIEAGAD-DIITNDDGSIEVLTPPNDLLNVQEALEKA--GFKPEMAEV 199

Query: 199 TFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNA 236
           T    N + ++GEDA++ QK +D L+  DDVQ+VY +A
Sbjct: 200 TMKALNESELTGEDAQRMQKLIDALESLDDVQEVYTSA 237