Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., protein YebC from Marinobacter adhaerens HP15

 Score =  155 bits (393), Expect = 5e-43
 Identities = 88/233 (37%), Positives = 136/233 (58%), Gaps = 8/233 (3%)

Query: 8   RKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVPAHVIEKA 67
           RKA+    +G   K+++K  +E+ V A+ GG +PD N  LR +I KA    +    IE+A
Sbjct: 13  RKAAQDAKRG---KIFTKIIRELTVAARQGGGNPDDNPRLRAVIDKALTANMKKDTIERA 69

Query: 68  LDKASGGAGED-YQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAKIGTPGV 126
           +++ +GG  +D Y+   YEG+GPGG ++ V+ +TDN NR+  ++R  F K G  +GT G 
Sbjct: 70  VERGTGGGDDDNYEEQTYEGYGPGGVAIFVEVMTDNKNRSVAEIRHAFNKMGGNLGTDGS 129

Query: 127 VAHMFDHQAVFQFQGD-DEEAILEALMMADAEVTDIEHEDGVITVFAPNTEFFKVKTALN 185
           VA++F  Q +  +  + +E+ ++EA++ A AE    + +DG   +     +F  VK +L 
Sbjct: 130 VAYLFSKQGIISYGPEWEEDRLVEAVLSAGAEDLAAQ-DDGSWEIVTTPEQFLDVKESLV 188

Query: 186 EAFPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHNADI 238
            A   L  D  E+T VP  R  +  + AE   K +DML+D DDVQ VYHNADI
Sbjct: 189 NA--GLVPDNAEVTMVPSTRVELDRDGAETILKLIDMLEDLDDVQNVYHNADI 239