Pairwise Alignments

Query, 239 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  158 bits (400), Expect = 8e-44
 Identities = 89/240 (37%), Positives = 134/240 (55%), Gaps = 8/240 (3%)

Query: 1   MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
           MGR+FE RKA+  K  G   K +++ GK+I +  K GG +P+ N +LR +I   K++ +P
Sbjct: 1   MGRAFEYRKAAKLKRWGHMAKTFTRLGKQIAIAVKAGGPEPENNPTLRSVIATCKRENMP 60

Query: 61  AHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKTGAK 120
              IE+A+  A G    DY+   YEG+GP G +V VD LTDN  RT  DVR  F K G  
Sbjct: 61  KDNIERAIKNAMGKDQSDYKSMTYEGYGPHGIAVFVDTLTDNTTRTVADVRSVFNKFGGN 120

Query: 121 IGTPGVVAHMFDHQAVFQFQGDD----EEAILEALMMADAEVTDIEHEDGVITVFAPNTE 176
           +GT G +A +FDH+ +F F+  D    EE IL+ +     +  + + E+G IT++     
Sbjct: 121 LGTMGSLAFLFDHKCMFTFKIKDGMDMEELILDLIDYDVEDEYEQDDEEGTITIYGDPKS 180

Query: 177 FFKVKTALNE-AFPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQVYHN 235
           +  ++  L E  F D+  D    T++P +   V+ E  E   K ++ L++ DDVQ VY N
Sbjct: 181 YAAIQKHLEECGFEDVGGD---FTYIPNDLKEVTPEQRETLDKMIERLEEFDDVQTVYTN 237