Pairwise Alignments

Query, 210 a.a., ribosomal RNA small subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB from Acidovorax sp. GW101-3H11

 Score =  145 bits (367), Expect = 4e-40
 Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 14/213 (6%)

Query: 4   LRVKLDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSL-V 62
           LR +L A     +L +++ Q   L+ ++ LL KWNK YNLT+VRDP EM+  H+LDSL  
Sbjct: 12  LRQQLQAGAEALALGLSDAQVGLLMDFLALLQKWNKVYNLTAVRDPQEMMTHHLLDSLAA 71

Query: 63  VSP---HLVG--------ERFIDVGSGPGLPGIPLAIMHPDKEFVLIDSLGKRIRFLKQV 111
           V+P   H+ G         + +DVGSG GLPG+  AI  PD +   +D++GK+  F++Q 
Sbjct: 72  VAPLRRHVAGLQQGGVAAVKLLDVGSGGGLPGVVFAICCPDVDVSCVDTVGKKAAFIQQA 131

Query: 112 IHDLKINNVLPVQSRVEEFDPESGFDGVLSRAFASMTDMVNWCQHLPKPNAGVFLALKGV 171
              LK+ N+  V +RVE     + FD +  RAFAS+ D V W +       GV+LA+KG 
Sbjct: 132 AVALKLRNLHGVHARVETL--STPFDLISCRAFASLPDFVTWSRSALAAPHGVWLAMKGK 189

Query: 172 RPDDEITLLPEWCSVTDIKALQVPELEGERHLV 204
            P+DEI  LP   +V  ++ L VP L+ ER +V
Sbjct: 190 HPEDEIAALPADVAVFHVEQLTVPGLDAERCIV 222