Pairwise Alignments

Query, 210 a.a., ribosomal RNA small subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., methyltransferase GidB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 12/157 (7%)

Query: 25  EQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSLVVSPHL------VGERFIDVGSG 78
           E + GY++LL  WN++ NL   R   +     ++DSL ++  L            D+G+G
Sbjct: 29  EAIAGYLELLLHWNRSMNLVGTRTWQDTFHTLVVDSLHLAAFLDTLPLPPEPEVWDLGAG 88

Query: 79  PGLPGIPLAIMHPDKEFVLIDSLGKRIRFLKQVI--HDLKINNVLPVQSRVEEFDP-ESG 135
            GLPGIPL        + ++++  KR  FL+  +  H L   NV   Q R E F P    
Sbjct: 89  AGLPGIPLRAAWQRGNYTMVEAREKRAMFLRMALARHPLPGTNVF--QGRAEAFMPSRPP 146

Query: 136 FDGVLSRAFASMTDMVNWCQ-HLPKPNAGVFLALKGV 171
            D V+SRAF    +++++   HL      VFL+L  V
Sbjct: 147 ADLVVSRAFMPWRELLDFVSGHLAPGGQVVFLSLDPV 183