Pairwise Alignments

Query, 210 a.a., ribosomal RNA small subunit methyltransferase G from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., 16S rRNA methyltransferase GidB (RefSeq) from Shewanella sp. ANA-3

 Score =  246 bits (628), Expect = 2e-70
 Identities = 122/201 (60%), Positives = 157/201 (78%), Gaps = 1/201 (0%)

Query: 4   LRVKLDALISKTSLTVTEQQREQLVGYVQLLDKWNKAYNLTSVRDPMEMLVKHILDSLVV 63
           L  +L+A +++ +L  T +Q++QL+ +V +L+KWNKAYNLTSVRDP  MLV+HI+DSLVV
Sbjct: 2   LSAQLEAYLAEINLPATAEQKKQLLDFVGMLNKWNKAYNLTSVRDPEAMLVRHIMDSLVV 61

Query: 64  SPHLVGERFIDVGSGPGLPGIPLAIMHPDKEFVLIDSLGKRIRFLKQVIHDLKINNVLPV 123
           SPHL GERFIDVG+GPGLPGIPLAIM+PDK FVL+DSLGKRIRF KQV  +L I+N+  +
Sbjct: 62  SPHLQGERFIDVGTGPGLPGIPLAIMNPDKTFVLLDSLGKRIRFQKQVAFELGIHNISSI 121

Query: 124 QSRVEEFDPESGFDGVLSRAFASMTDMVNWCQHLPKPNAGVFLALKGVRPDDEITLLPEW 183
           +SRVE + PE  FDGVLSRAFAS+ DM+ WC HLP  + G F ALKG+  D+E+  +P  
Sbjct: 122 ESRVEAYQPEQKFDGVLSRAFASIHDMLTWCHHLPAEH-GQFYALKGLLSDEEMQQIPAG 180

Query: 184 CSVTDIKALQVPELEGERHLV 204
             VT+   LQVP L+ +RHL+
Sbjct: 181 FVVTETIELQVPRLDEQRHLL 201