Pairwise Alignments

Query, 293 a.a., chromosome partitioning protein ParB from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., ParB family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  309 bits (791), Expect = 6e-89
 Identities = 163/294 (55%), Positives = 221/294 (75%), Gaps = 6/294 (2%)

Query: 1   MTKRGLGKGLDALLATSSLAREKQ--QVASLSQSMSAEGELADLSISNLKPGIYQPRKDL 58
           + KRGLGKGLDALL+ S  A +KQ  +VA + +    + EL  L +  L+PG YQPRKD+
Sbjct: 3   LKKRGLGKGLDALLSHSHAANKKQTEEVAVVEK----KEELIHLDLDLLQPGKYQPRKDM 58

Query: 59  SPEALEELAASIQSQGIIQPIVVRHLPTGGYEIIAGERRWRAAKQAGLKQVPCLIKQVED 118
           SPEALEELA SI++QGIIQPIVVR +    YEIIAGERRWRA++ AG+ ++PC++K V D
Sbjct: 59  SPEALEELAHSIRNQGIIQPIVVRPVSETQYEIIAGERRWRASQLAGVDKIPCIVKPVPD 118

Query: 119 RGAIAMALIENIQREDLNAMEEAQALERLQNEFNLTHQQVAEVIGKSRTTVTNLLRLNQL 178
             A+A+ALIENIQREDLNAMEEA AL+RL  EF LTHQQVA+V+GKSR +V+NLLRLN L
Sbjct: 119 EAAVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGL 178

Query: 179 SDDVKRLLETKQLEMGHARALLMLEGEQQVEIAQQVAKKQLTVRQTEQLVKKCLSDPSDA 238
           ++ VKRLLE   ++MGHARALL +EGE+Q  +A+ VA K+LTVR+TE+L+ + L+ P   
Sbjct: 179 NEPVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKPV 238

Query: 239 KNVSEDLEIQQLSQNLSEKLAAKVSIVRTPNGKSKVTISLDEPHKLELLIAKLQ 292
           +  ++D ++ +L Q L E+L AKVSI  +  GK K+ I+     +L+ +++K++
Sbjct: 239 ETTTKDQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGILSKIR 292