Pairwise Alignments

Query, 270 a.a., ATP synthase subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., ATP synthase F0, A subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  345 bits (885), Expect = e-100
 Identities = 173/273 (63%), Positives = 211/273 (77%), Gaps = 14/273 (5%)

Query: 1   MAAPGEALTPSSYITHHLTNLSTYKLGLVAEESSFWNVHIDSLFFSVLTGLIFLGVFRAV 60
           MAAPGEALTP  YI HHLTNL   +         FW  HIDSLFFSV  G++FL +FR+V
Sbjct: 1   MAAPGEALTPQGYIQHHLTNLHVGE--------GFWTWHIDSLFFSVGLGVLFLWIFRSV 52

Query: 61  ARKATAGVPGKLQCAVEMVVEFVDKNVKDTFHGRNPLIAPLALTIFCWVFLMNLMDLVPI 120
            +KAT+GVPGKLQC +EM+VEFVD +VK++FHGRN LIAPLALTIF WVF+MN MD++P+
Sbjct: 53  GKKATSGVPGKLQCFIEMIVEFVDNSVKESFHGRNALIAPLALTIFMWVFMMNFMDMIPV 112

Query: 121 DFLPYPAQHWLGIPYLKVVPSADVNITMAMALGVFALMIYYSIKVKGLGGFAKELALHPF 180
           D+LP+ A    GIPYLKVVP+ DVNIT ++A+GVF L+IYYSIKVKG+ GF KEL L PF
Sbjct: 113 DWLPWLAS-LAGIPYLKVVPTTDVNITFSLAIGVFVLIIYYSIKVKGVSGFVKELTLQPF 171

Query: 181 NHWIMIPFNLLIEVVSLLAKPLSLGMRLFGNMFAGEVVFILCAAMLPWYLQWMG-----S 235
           NH  MIP NLL+E V+L+AKP+SL +RLFGN++AGE++FIL A M    L          
Sbjct: 172 NHKAMIPVNLLLETVTLIAKPISLALRLFGNLYAGELIFILIALMYGTNLLLSSLGVTLQ 231

Query: 236 LPWAIFHILVILIQSFVFMMLTIVYMSMAHEDN 268
           L W IFHILVI +Q+F+FMMLTIVY+SMAHED+
Sbjct: 232 LGWLIFHILVITLQAFIFMMLTIVYLSMAHEDH 264