Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

 Score =  127 bits (318), Expect = 1e-33
 Identities = 102/371 (27%), Positives = 170/371 (45%), Gaps = 27/371 (7%)

Query: 72  GAVVMGPYAD----LREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPIGA--KQ 125
           GAV++    D     RE M +  TG  L++     LLG VV+  G  ++   P  A  ++
Sbjct: 44  GAVLLSLLGDGRGLSRESM-IVPTGSTLQLACSDALLGSVVDPQGRIVERLAPSTAVAQR 102

Query: 126 TSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDAIIN 185
             PV+   P    R+ V +P++TG + +D ++  G GQR  I     +GKT L I+ +I 
Sbjct: 103 DCPVDADPPPYQQRRPVAEPLRTGIRVIDGLLTCGVGQRIGIFAAAGSGKTTL-INMLIE 161

Query: 186 QKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYSGCAM 245
             ++ ++ I + IG++   +   +  L +       +VV A++  S+  +  +      +
Sbjct: 162 HTDAEVFVIGL-IGERGREVTEFIAHLRQSPKHSRCVVVFATSDFSSVDRCNSALQATTI 220

Query: 246 GEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVN 305
            EYFRD+G   +++ D L++ A A R ++L     P R  +P  VF    RLLER     
Sbjct: 221 AEYFRDQGWRVVLLLDSLTRYARARRDLALAAGEAPARRGYPASVFDALPRLLERPGVT- 279

Query: 306 EEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVR 365
                          TGS+TA   +  ++ D    +   + SI DG ++L   L   G  
Sbjct: 280 --------------ATGSITAWYTVLLESDDEPDPIAEEIRSILDGHVYLSRALAAKGHY 325

Query: 366 PAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAF---AQFSSDLDEATKRQLT 422
           PA+D   SVSRV     T  V++L+   R  LA   +L  F    ++S  +D A  R + 
Sbjct: 326 PAIDVLRSVSRVATQVTTPQVQQLAASTRETLARLEQLQVFLDMGEYSPGVDAANDRAMH 385

Query: 423 HGQKVTELMKQ 433
               +   ++Q
Sbjct: 386 RRDALDRWLRQ 396