Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., proton translocating ATP synthase, F1 alpha subunit from Pseudomonas stutzeri RCH2

 Score =  786 bits (2029), Expect = 0.0
 Identities = 401/512 (78%), Positives = 454/512 (88%)

Query: 2   QLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRYA 61
           QLN +EIS++IKQRIE  NV ++ARNEGT+VSVSDGI+RI+GLADVM GEMIE PG  + 
Sbjct: 3   QLNPSEISEIIKQRIEKSNVAAQARNEGTVVSVSDGIVRIYGLADVMYGEMIEFPGGVFG 62

Query: 62  LALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPI 121
           +ALNLE+DSVGAVV+G Y  L EGM    TGRILEVPVGPELLGRVV+ LG PIDGKGPI
Sbjct: 63  MALNLEQDSVGAVVLGNYLGLTEGMSAKCTGRILEVPVGPELLGRVVDALGNPIDGKGPI 122

Query: 122 GAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAID 181
            A+ T  VE +APGVI RKSVDQPVQTGYKSVD+MIP+GRGQRELIIGDRQ GKTALAID
Sbjct: 123 NAQATDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKTALAID 182

Query: 182 AIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYS 241
           AIINQKNSGI  +YVAIGQK STIANVVRKLEEHGA+ NTIVV ASASESAALQ+LAPY+
Sbjct: 183 AIINQKNSGIRCVYVAIGQKQSTIANVVRKLEEHGAMHNTIVVAASASESAALQFLAPYA 242

Query: 242 GCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERA 301
           GC MGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREA+PGDVFYLHSRLLERA
Sbjct: 243 GCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA 302

Query: 302 ARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFN 361
           +RV+EEYVE+FT G V GKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFL++ +FN
Sbjct: 303 SRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFN 362

Query: 362 AGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSDLDEATKRQL 421
           AG+RPAV+ GISVSRVGGAAQTKIVKKLSGGIRTALA YRELAAFAQF+SDLDEAT++QL
Sbjct: 363 AGIRPAVNAGISVSRVGGAAQTKIVKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQL 422

Query: 422 THGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALLSYARAHYAE 481
            HGQ+VTELMKQKQYAPMS+ D +L ++AAERG+LTDV++ KV  FE AL+++    +A+
Sbjct: 423 EHGQRVTELMKQKQYAPMSIADMSLSLYAAERGFLTDVDVAKVGAFEQALIAFFNREFAD 482

Query: 482 LAAQIDKTGAYNDEIEAQLKKLVDDFKATQTW 513
           L A+I+  G +NDEI+A LK  ++ FKATQ+W
Sbjct: 483 LMAKINVKGDFNDEIDAGLKAGIEKFKATQSW 514