Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., F0F1 ATP synthase subunit alpha from Synechococcus elongatus PCC 7942

 Score =  546 bits (1407), Expect = e-160
 Identities = 273/508 (53%), Positives = 374/508 (73%), Gaps = 11/508 (2%)

Query: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60
           + +   EIS +I+Q+IE ++   +  N GT++ V DGI RI+GL  VM GE++E      
Sbjct: 2   VSIRPDEISSIIRQQIEQYSQDVKVENVGTVLQVGDGIARIYGLQQVMSGELVEFEDGTT 61

Query: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120
            +ALNLE D+VGAV+MG   +++EG  V  TG+I ++PVG  L+GRVV+ LG P+DGKG 
Sbjct: 62  GIALNLEEDNVGAVLMGEGRNIQEGSTVKATGKIAQIPVGDALVGRVVSPLGAPLDGKGE 121

Query: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180
           I A +   +E  APG+I R+SV +P+QTG  ++D+MIPIGRGQRELIIGDRQTGKTA+AI
Sbjct: 122 IAATENRLIESPAPGIIARRSVHEPMQTGITAIDAMIPIGRGQRELIIGDRQTGKTAIAI 181

Query: 181 DAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPY 240
           D I+NQK   +  +YVAIGQKAS++AN++  L E GAL  T+VV A+ASE A LQYLAPY
Sbjct: 182 DTILNQKGEDVICVYVAIGQKASSVANIIEVLRERGALDYTVVVAANASEPATLQYLAPY 241

Query: 241 SGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER 300
           +G A+ EYF  +G+  L++YDDL+KQA AYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER
Sbjct: 242 AGAAIAEYFMCKGKATLVIYDDLTKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 301

Query: 301 AARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELF 360
           AA++++               GS+TALP+IETQAGDVSA++PTNVISITDGQIFL ++LF
Sbjct: 302 AAKLSDAL-----------GGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSSDLF 350

Query: 361 NAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSDLDEATKRQ 420
           N+G+RPA++ GISVSRVG AAQTK +KK++G ++  LA + ELAAFAQF+SDLD+AT+ Q
Sbjct: 351 NSGLRPAINVGISVSRVGSAAQTKAIKKIAGTLKLELAQFDELAAFAQFASDLDKATQNQ 410

Query: 421 LTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALLSYARAHYA 480
           L  GQ++ EL+KQ Q++P+ + +Q  V++A  +G + ++ +N+V  F + L SY +    
Sbjct: 411 LARGQRLRELLKQPQFSPLILAEQVAVVYAGVKGLIDEIPVNQVTAFVSELRSYLKTSKP 470

Query: 481 ELAAQIDKTGAYNDEIEAQLKKLVDDFK 508
           E   ++  +   +D  EA LK+ + + K
Sbjct: 471 EFIEKVQSSKQLDDAAEALLKEAIAEVK 498