Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  132 bits (332), Expect = 3e-35
 Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 22/332 (6%)

Query: 46  DVMQGEMIELPGNRYALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLG 105
           D M GE+I       A  +  + D +  + +     +  G +V   G    + VG  LLG
Sbjct: 54  DTMGGELI-------AEVVGFDEDLLYLMPIEELKGVLPGARVRPLGEQTGIHVGMSLLG 106

Query: 106 RVVNTLGEPIDGKGPIGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRE 165
           RV++  GEP+DG GP+G    +P    A   + R+ + +P+  G +++++M+ +G+GQR 
Sbjct: 107 RVLDGGGEPLDGLGPLGTTDIAPRHGPAINPLARRPIHEPLDVGIRAINAMLTVGKGQRM 166

Query: 166 LIIGDRQTGKTALAIDAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVV 225
            +      GK+ L    ++ +  +    +   +G++   +   + ++        ++VV 
Sbjct: 167 GLFAGSGVGKSVLL--GMMTRGTTADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVA 224

Query: 226 ASASESAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREA 285
           A A  S  ++  A  +   + EYFRD G + L++ D L++ A A R+I+L +  PP  + 
Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGFNVLLLMDSLTRYAQAQREIALAVGEPPATKG 284

Query: 286 FPGDVFYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNV 345
           +P  VF    RL+ERA             G      GS+TA   + T+  D+   +    
Sbjct: 285 YPPSVFAKLPRLVERA-------------GNGGPGQGSITAFYTVLTEGDDLQDPIADAA 331

Query: 346 ISITDGQIFLQTELFNAGVRPAVDPGISVSRV 377
            +I DG I L   L ++G  PA+D   S+SRV
Sbjct: 332 RAILDGHIVLSRTLADSGHYPAIDIEASISRV 363