Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., ATP synthase F1, alpha subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  551 bits (1419), Expect = e-161
 Identities = 288/516 (55%), Positives = 376/516 (72%), Gaps = 20/516 (3%)

Query: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60
           M++ + EIS ++K++I +F   +E+   G ++SV DGI R++GL +V  GEM+E      
Sbjct: 1   MEIRAAEISAILKEQIANFGTEAESAEVGQVLSVGDGIARVYGLDNVQAGEMVEFANGVK 60

Query: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120
            +ALNLE D+VG V+ G    ++EG  V  T  I++VPVG  LLGRVV+ LG PIDGKG 
Sbjct: 61  GMALNLESDNVGIVIFGEDRGIKEGDVVKRTQTIVDVPVGKGLLGRVVDGLGNPIDGKGD 120

Query: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180
           +   +    EV APG+I RKSV +PVQTG K++DS+IPIGRGQRELIIGDRQTGKTA+ +
Sbjct: 121 LVDVERKRAEVKAPGIIPRKSVHEPVQTGIKAIDSLIPIGRGQRELIIGDRQTGKTAVIL 180

Query: 181 DAIINQK---------NSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASES 231
           D I+NQK         +  ++ +YVA+GQK ST+A VV+ L +HGAL  TIVV A+ASE 
Sbjct: 181 DTILNQKAVNDKAKDDSEKLFCVYVAVGQKRSTVAQVVKVLADHGALDYTIVVAATASEP 240

Query: 232 AALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVF 291
           A LQ+LAPY+GC MGE+FRD G  A+I YDDL+KQAVAYRQ+SLLLRRPPGREAFPGDVF
Sbjct: 241 APLQFLAPYTGCTMGEFFRDNGMHAVIFYDDLTKQAVAYRQMSLLLRRPPGREAFPGDVF 300

Query: 292 YLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDG 351
           YLHSRLLERAA++N++              GSLTALP+IETQA DVSA++PTNVISITDG
Sbjct: 301 YLHSRLLERAAKLNDD-----------NGAGSLTALPVIETQANDVSAYIPTNVISITDG 349

Query: 352 QIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSS 411
           QIFL+T+LF  G+RPAV+ G+SVSRVG +AQ K +K+++G I+  LA YRE+AAFAQF+S
Sbjct: 350 QIFLETDLFFKGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKLELAQYREMAAFAQFAS 409

Query: 412 DLDEATKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAAL 471
           DLD AT++ L  G ++TEL+KQ QY+P++V +Q  VI+A  RGYL  ++   V+ +EA+L
Sbjct: 410 DLDPATQKLLARGARLTELLKQAQYSPLAVEEQVCVIYAGTRGYLDKLKTTDVVRYEASL 469

Query: 472 LSYARAHYAELAAQIDKTGAYNDEIEAQLKKLVDDF 507
           L   R   A+L   I    A + EIE +L K +DDF
Sbjct: 470 LGALRTSGADLLESIRTGKALSKEIEQKLVKFLDDF 505