Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  156 bits (395), Expect = 1e-42
 Identities = 120/418 (28%), Positives = 193/418 (46%), Gaps = 35/418 (8%)

Query: 20  NVVSEARNEGTIVSVSDGIIRIHG------LADVMQGEMIEL--PGNRYALALNLERDSV 71
           +++ EA + G  V V   + ++ G      +  V  GE+  L  P   + L   +     
Sbjct: 8   SLLEEAVHSGPTVEVRGRVEQVVGTIIRAVVPGVKVGELCILRNPWENWTLRAEVVGFVK 67

Query: 72  GAVVMGPYADLR---EGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPIGAKQTSP 128
              ++ P  DL+      +V  TG IL +PVG +LLGRV++ LGEP+DG  P+  +   P
Sbjct: 68  QVALLTPLGDLQGVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYP 127

Query: 129 VEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQKN 188
           V    P  + R+ +D+P+  G + +D ++  G GQR  I      GK+ L + +II   +
Sbjct: 128 VYAQPPNPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTL-LSSIIKGCS 186

Query: 189 SGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEY 248
           + +  +   IG++   +   +         K  ++VV+++  S+  +  A Y+  A+ EY
Sbjct: 187 ADV-CVLALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEY 245

Query: 249 FRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNEEY 308
           FRD+    L++ D +++   A R+I L    PP R  FP  VF    RL+ERA   ++  
Sbjct: 246 FRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDK-- 303

Query: 309 VERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAV 368
                        GS+TAL  +  +  D++  +     SI DG I L  +L  A   PA+
Sbjct: 304 -------------GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAI 350

Query: 369 DPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQF-------SSDLDEATKR 419
           D   SVSRV  A   K  K  +  +R  LA Y E+    Q          + DEA  R
Sbjct: 351 DVQASVSRVMNAIVDKEHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDR 408