Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., ATP synthase F1, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  142 bits (359), Expect = 2e-38
 Identities = 105/418 (25%), Positives = 189/418 (45%), Gaps = 29/418 (6%)

Query: 29  GTIVSVSDGIIRIH----GLADVMQGEMIELPGNRYALALNLERDSVGAVV----MGPYA 80
           GT+V V   ++ +      +  V     I   G+   L L +++   G VV    MG   
Sbjct: 4   GTVVQVIGAVVDVEFPQDAVPQVYDALKITGEGSCNGLVLEVQQQLGGGVVRTIAMGTSD 63

Query: 81  DLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGPIGAKQTSPVEVIAPGVIDRK 140
            LR G++V  +G  + VPVG   LGR++N LG+PID  G IG ++   +   AP   ++ 
Sbjct: 64  GLRRGLEVVNSGSPISVPVGTATLGRIMNVLGDPIDEAGAIGEEERYVIHRAAPSYEEQS 123

Query: 141 SVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDAIIN--QKNSGIYSIYVAI 198
           +  + ++TG K +D + P  +G +  + G    GKT   ++ I N  + +SG+ S++  +
Sbjct: 124 NTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGL-SVFAGV 182

Query: 199 GQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPYSGCAMGEYFRDRGEDALI 258
           G++     +   ++++ G L    +V    +E    +     +G  M E FRD G D L+
Sbjct: 183 GERTREGNDFYYEMKDSGVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 242

Query: 259 VYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNEEYVERFTKGEVK 318
             D++ +  +A  ++S LL R P    +   +      L ER                  
Sbjct: 243 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITST-------------- 288

Query: 319 GKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELFNAGVRPAVDPGISVSR-V 377
            KTGS+T++  +   A D++   P    +  D  + L  ++ + G+ PAVDP  S SR +
Sbjct: 289 -KTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQL 347

Query: 378 GGAAQTKIVKKLSGGIRTALAAYRELAAFAQF--SSDLDEATKRQLTHGQKVTELMKQ 433
                 +    ++ G++T L  Y+EL          +L +  K  ++  +K+   + Q
Sbjct: 348 DPLVVGQEHYDVANGVQTVLQRYKELKDIIAILGMDELSDDDKMTVSRARKIERFLSQ 405