Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., proton translocating ATP synthase, F1 alpha subunit from Sphingomonas koreensis DSMZ 15582

 Score =  568 bits (1463), Expect = e-166
 Identities = 294/518 (56%), Positives = 386/518 (74%), Gaps = 19/518 (3%)

Query: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60
           M + + EIS +IK +I +F   +E    G ++SV DGI R+HGL +V  GEM+E      
Sbjct: 1   MDIRAAEISKVIKDQIANFGTEAEVSETGQVLSVGDGIARVHGLDNVQAGEMVEFANGVQ 60

Query: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120
            +ALNLE D+VG V+ G  ++++EG  V  TG I++VPVG  LLGRVV+ LG PIDGKGP
Sbjct: 61  GMALNLEADNVGIVIFGSDSEIKEGDVVKRTGTIVDVPVGKGLLGRVVDGLGNPIDGKGP 120

Query: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180
           I + Q S VEV APG+I RKSV +PVQTG K++D+++P+GRGQRELIIGDRQTGK+A+AI
Sbjct: 121 IVSDQRSRVEVKAPGIIPRKSVHEPVQTGLKAIDALVPVGRGQRELIIGDRQTGKSAVAI 180

Query: 181 DAIINQK--NSG------IYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESA 232
           D  INQK  N+G      +Y +YVA+GQK ST+A +VR LEE+GA++ +IVV A+AS+ A
Sbjct: 181 DTFINQKTVNAGDDEGKKLYCVYVAVGQKRSTVAQLVRTLEENGAMEYSIVVAATASDPA 240

Query: 233 ALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFY 292
            LQ+LAPY+GCAMGEYFRD G  A+IVYDDLSKQAVAYRQ+SLLLRRPPGREA+PGDVFY
Sbjct: 241 PLQFLAPYTGCAMGEYFRDNGMHAVIVYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFY 300

Query: 293 LHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQ 352
           LHSRLLERAA++N+               GSLTALPIIETQAGDVSA++PTNVISITDGQ
Sbjct: 301 LHSRLLERAAKLND-----------ANGNGSLTALPIIETQAGDVSAYIPTNVISITDGQ 349

Query: 353 IFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSD 412
           IFL+T+LF AG+RPA++ G+SVSRVG +AQTK +KK+SG I+  LA YRE+AAFAQF SD
Sbjct: 350 IFLETDLFFAGIRPAINVGLSVSRVGSSAQTKAMKKVSGSIKLELAQYREMAAFAQFGSD 409

Query: 413 LDEATKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALL 472
           LD +T++ L  G ++TEL+KQ Q++P+   +Q + IFA   GY+  V +  V+ +EAA+L
Sbjct: 410 LDASTQKLLNRGARLTELLKQPQFSPLPFEEQTVSIFAGTNGYIDSVPVQDVVRYEAAML 469

Query: 473 SYARAHYAELAAQIDKTGAYNDEIEAQLKKLVDDFKAT 510
           +  R+ +A++   I  +   +D  + +LK  ++ F  T
Sbjct: 470 AEMRSKHADILKDIRDSKDLSDATKGKLKDALEAFGKT 507