Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., ATP synthase, F1 alpha subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  552 bits (1422), Expect = e-161
 Identities = 278/508 (54%), Positives = 373/508 (73%), Gaps = 11/508 (2%)

Query: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60
           MQ+ + EIS +I+++I+S+    E    GT++ V DGI R+HG+ + M  E++E PG   
Sbjct: 1   MQIKAEEISKIIEEQIQSYEQRVEMSETGTVLYVGDGIARVHGVQNAMAMELLEFPGGLM 60

Query: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120
            + LNLE D+VG  ++G    ++EG  V  TG+I  VPVG  ++GRV+N LG+PIDG GP
Sbjct: 61  GMVLNLEEDNVGVALLGDDTQIKEGDPVKRTGKIFSVPVGDAVMGRVLNPLGQPIDGLGP 120

Query: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180
           + AK+  PVE+ APG+I RKSV +P+ TG K++D+M PIGRGQREL+IGDRQTGKTA+ I
Sbjct: 121 LDAKEFRPVELKAPGIIARKSVHEPMPTGIKAIDAMTPIGRGQRELVIGDRQTGKTAVCI 180

Query: 181 DAIINQKNSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASESAALQYLAPY 240
           DAI+ QKN+ I+  YVAIGQK +T+A V   L ++GA++ T ++ A+ASE A LQ+++ Y
Sbjct: 181 DAILAQKNTDIHCFYVAIGQKKATVALVADTLRKYGAMEYTTIISATASEPAPLQFISAY 240

Query: 241 SGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLER 300
           SGC M E++R+ G+ ALI+YDDLSKQAVAYRQ+SLLLRRPPGREA+PGDVFYLHSRLLER
Sbjct: 241 SGCTMAEFYRNNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLER 300

Query: 301 AARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLQTELF 360
           AA+VN+               GSLTALPIIETQAGDVSA++PTNVISITDGQ++L+  LF
Sbjct: 301 AAKVNDSL-----------GAGSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLF 349

Query: 361 NAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFSSDLDEATKRQ 420
           NAG+RPA++ G+SVSRVGGAAQ K +K+++G +R  LA YRELAAFAQF SDLD+ATK +
Sbjct: 350 NAGIRPAINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRELAAFAQFGSDLDKATKAK 409

Query: 421 LTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAALLSYARAHYA 480
           L  G ++ EL+KQ QY PM   +Q   ++AA RG + DV +  +  FE A+L Y R+  A
Sbjct: 410 LDRGARLVELLKQPQYEPMPTEEQVASMYAATRGLMDDVAVADIRKFETAMLDYLRSGKA 469

Query: 481 ELAAQIDKTGAYNDEIEAQLKKLVDDFK 508
           ++   I    A + +IE +LK  + +FK
Sbjct: 470 DILNDIKTKKALDQDIENRLKAAIAEFK 497