Pairwise Alignments

Query, 513 a.a., ATP synthase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., ATP synthase F1, alpha subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  542 bits (1396), Expect = e-158
 Identities = 284/521 (54%), Positives = 375/521 (71%), Gaps = 22/521 (4%)

Query: 1   MQLNSTEISDLIKQRIESFNVVSEARNEGTIVSVSDGIIRIHGLADVMQGEMIELPGNRY 60
           M + + EIS ++K++I++F   +E    G ++SV DGI R+HGL +V  GEM+E PG   
Sbjct: 1   MGIQAAEISAILKEQIKNFGQEAEVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIR 60

Query: 61  ALALNLERDSVGAVVMGPYADLREGMKVTGTGRILEVPVGPELLGRVVNTLGEPIDGKGP 120
            +ALNLE D+VG V+ G   D++EG  V  T  I++VPVG  LLGRVV+ LG P+DGKGP
Sbjct: 61  GMALNLEIDNVGVVIFGSDRDIKEGDIVKRTKSIVDVPVGDALLGRVVDGLGNPLDGKGP 120

Query: 121 IGAKQTSPVEVIAPGVIDRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAI 180
           I   + S  +V APG+I RKSV +P+ TG KSVD+MIPIGRGQRELIIGDRQTGKTA+A+
Sbjct: 121 IETTERSIADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAVAL 180

Query: 181 DAIINQK----------NSGIYSIYVAIGQKASTIANVVRKLEEHGALKNTIVVVASASE 230
           D I+NQK          +  +Y +YVA+GQK ST+A +V+KLEE GA++ +IVV A+AS+
Sbjct: 181 DTILNQKAYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIVVAATASD 240

Query: 231 SAALQYLAPYSGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAFPGDV 290
            A +Q+LAPY+  +M E+FRD G  ALI+YDDLSKQAV+YRQ+SLLLRRPPGREA+PGDV
Sbjct: 241 PAPMQFLAPYAATSMAEFFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAYPGDV 300

Query: 291 FYLHSRLLERAARVNEEYVERFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITD 350
           FYLHSRLLER+A++ +++             GSLTALPIIETQ GDVSAF+PTNVISITD
Sbjct: 301 FYLHSRLLERSAKLGDDH-----------GNGSLTALPIIETQGGDVSAFIPTNVISITD 349

Query: 351 GQIFLQTELFNAGVRPAVDPGISVSRVGGAAQTKIVKKLSGGIRTALAAYRELAAFAQFS 410
           GQIFL+TELF  G+RPAV+ G+SVSRVG +AQT  +K ++G ++  LA YRE+AAFAQF 
Sbjct: 350 GQIFLETELFYQGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYREMAAFAQFG 409

Query: 411 SDLDEATKRQLTHGQKVTELMKQKQYAPMSVFDQALVIFAAERGYLTDVELNKVLDFEAA 470
           SDLD AT++ L  G ++TELMKQ QY+P++  +   VIFA  +GYL  + +  V  +E  
Sbjct: 410 SDLDAATQQLLNRGARLTELMKQPQYSPLTNAEIVCVIFAGTKGYLDKIPVGDVGRYEKG 469

Query: 471 LLSYARAHYAELAAQIDKTG-AYNDEIEAQLKKLVDDFKAT 510
           LL++ R  +  L   I K       E E +++  +D+F AT
Sbjct: 470 LLAHLRGKHKGLLDYITKEDPKIKGEAEDKIRAALDEFAAT 510