Pairwise Alignments

Query, 288 a.a., ATP synthase subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., ATP synthase, F1 gamma subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  183 bits (464), Expect = 4e-51
 Identities = 106/290 (36%), Positives = 168/290 (57%), Gaps = 3/290 (1%)

Query: 1   MAGAKEIRTKIGSVKSTQKITKAMEMVAASKMRRSQDAMESSRPYAQTIRKVIGHVANAS 60
           M   K+++ KI  VK T++ITKAM MVA++K+R +Q  +E  RPYA+    ++G +A+ +
Sbjct: 1   MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYGMLGDLASKA 60

Query: 61  LEYRHPYLEER-EAKRVGYIIISTDRGLCGGLNINLFKKAITDMQTWKEKGAQIELAIIG 119
               HP LE R E K  G ++ ++DRGLCG  N NL   A+   +    +G  ++   +G
Sbjct: 61  DGSAHPLLEVRDEIKTCGIVLATSDRGLCGSFNANLISTALKLAKQKAAEGKTVKFYCVG 120

Query: 120 SKATAFFNNSGAKVAAQVSGLGDSPSLEDLIGSVGV-MLKKYDKGELDRLYLVFNQFVNT 178
            K       +  +V   ++    S   + L   +G+ ++  Y  GELD + LV+ +FV+T
Sbjct: 121 KKGRDTIRKADFEVVTAIADQMGSFDFQ-LANKLGLEVINHYLTGELDEVVLVYGEFVST 179

Query: 179 MVQKPKIDQLLPLPKSDSEDMQRDHMWDYIYEPEPKPLLDALLLRFIESQVYQGVVENLA 238
             Q P    +LP+     ++ +     +YIYEP  + LL  LL RFI+ Q+Y+G+++  A
Sbjct: 180 AKQLPITLPILPIASEKKDEAEAAPSKEYIYEPAVEGLLAELLPRFIKVQIYRGLLDTSA 239

Query: 239 CEQAARMVAMKAATDNASNLIDDLQLVYNKARQAAITQELSEIVGGAAAV 288
            E AARM AM  AT +  ++I  L L++NK RQA+IT++L +IVGGA A+
Sbjct: 240 SEHAARMAAMDNATRSCDDMIGALTLLFNKTRQASITRDLMDIVGGAEAL 289