Pairwise Alignments

Query, 288 a.a., ATP synthase subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., ATP synthase F1, gamma subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  157 bits (396), Expect = 3e-43
 Identities = 101/293 (34%), Positives = 157/293 (53%), Gaps = 8/293 (2%)

Query: 1   MAGAKEIRTKIGSVKSTQKITKAMEMVAASKMRRSQDAMESSRPYAQTIRKVI-GHVANA 59
           M   K+++ +I SVKST+KITKAM+MVAA+K+RR+QDA E+SRPY +    V+ G  A+ 
Sbjct: 1   MPNLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASV 60

Query: 60  SLEYRHPYLEEREAKRVGYIII--STDRGLCGGLNINLFKKAITDMQTWKEKGAQIELAI 117
                 P L         ++++  + +RGLCGG N ++ K A    +    +G  +++  
Sbjct: 61  GDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILT 120

Query: 118 IGSKATAFFNNSGAKVAAQVSGLGDSP--SLEDLIGSVGVMLKKYDKGELDRLYLVFNQF 175
           +G K         +K       L +    S ++       +L ++D GE D   + FN+F
Sbjct: 121 VGKKGREQLKRDLSKHFIGHVDLSEVKRVSYDNAADIAADVLGRFDAGEFDVATIFFNRF 180

Query: 176 VNTMVQKPKIDQLLPLPKSDSEDMQRDHMWDYIYEPEPKPLLDALLLRFIESQVYQGVVE 235
            + + Q P   Q++P       D        Y YEP  + +L  LL R + +Q++  ++E
Sbjct: 181 QSVISQIPTAQQIIPASFEGDADADATL---YDYEPSEEAILADLLPRGVATQIFAALLE 237

Query: 236 NLACEQAARMVAMKAATDNASNLIDDLQLVYNKARQAAITQELSEIVGGAAAV 288
           N A EQ ARM AM  AT NA ++I+ L + YN++RQA IT EL EI+ GA A+
Sbjct: 238 NGASEQGARMSAMDNATRNAGDMIERLTIEYNRSRQAVITNELIEIISGAEAL 290