Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  155 bits (392), Expect = 3e-42
 Identities = 116/398 (29%), Positives = 197/398 (49%), Gaps = 41/398 (10%)

Query: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSS 60
           +A G++V+++G  ++    ++ V S    L  +D+           +GG +I  +V    
Sbjct: 25  VAEGQLVRVVGLTLEASGCRAPVGS----LCAIDT-----------MGGELIAEVVGFDE 69

Query: 61  D-----------GLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYS 109
           D           G+  G  V+  G    + VG   LGR+++  G+ +D  G +G  ++  
Sbjct: 70  DLLYLMPIEELKGVLPGARVRPLGEQTGIHVGMSLLGRVLDGGGEPLDGLGPLGTTDIAP 129

Query: 110 IHRPAPSYEEQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAL 169
            H PA +   +    E L+ G++ I+ +    KG ++GLF G+GVGK+V +  +      
Sbjct: 130 RHGPAINPLARRPIHEPLDVGIRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTT- 188

Query: 170 QHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQPE-LSKVAMVYGQMNEPPGNRLRVA 228
             + + V   VGER RE  +F  E        +  PE  ++  +V    +  P  RLR  
Sbjct: 189 --ADVIVVGLVGERGREVKEFIEE--------ILGPEGRARSVVVAAPADTSPLMRLRAC 238

Query: 229 LTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 288
            T   +AE FRD G +VLL +D++ RY  A  E++  +G  P+  GY P++  ++  L E
Sbjct: 239 ETSTRIAEYFRDLGFNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVE 298

Query: 289 RITS--TKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLD 346
           R  +    +GSIT+   V    DDL DP      A LD  +VL+R +A  G YPAID ++
Sbjct: 299 RAGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRTLADSGHYPAID-IE 357

Query: 347 STSRQLDPLVVGQEHYDVARGVQATLQRYKELKDIIAI 384
           ++  ++ P+V+   H +  R V+ T   Y++ +D+I+I
Sbjct: 358 ASISRVAPMVISPAHLEAMRRVKQTYSLYQQNRDLISI 395