Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella loihica PV-4

 Score =  149 bits (377), Expect = 1e-40
 Identities = 112/385 (29%), Positives = 188/385 (48%), Gaps = 17/385 (4%)

Query: 2   ATGKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSSD 61
           A+G++V+++G  ++    ++ V S+     +       V+    +L    +  + +    
Sbjct: 26  ASGQLVRVVGLTLEATGCKAPVGSLCSIATMAGDLIAEVIGFDDKL----LYLMPIEELS 81

Query: 62  GLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQS 121
           G+  G  V   G    + VG   LGR+++  G  ID  G +  ++  + H    +   + 
Sbjct: 82  GVMPGAKVTPLGEQTGLNVGMGLLGRVLDGNGAPIDGLGQLHTDQKATRHATMLNPLARR 141

Query: 122 SATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVG 181
           + +E L+ GV+ I+ +    KG ++GLF G+GVGK+V +  +        + + V   VG
Sbjct: 142 AISEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTT---ADVIVVGLVG 198

Query: 182 ERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDE 241
           ER RE  +F  E+  A          S+  +V    +  P  RLR   T   +AE FRD 
Sbjct: 199 ERGREVKEFIEEILGA-------EGRSRSVVVAAPADTSPLMRLRACETSTRIAEYFRDL 251

Query: 242 GRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITS--TKKGSIT 299
           G +VLL +D++ RY  A  E++  +G  P+  GY P++  ++  L ER  +    +GSIT
Sbjct: 252 GYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGAGQGSIT 311

Query: 300 SVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQ 359
           +   V    DDL DP      A LD  +VL+R +A  G YPAID   S SR + P+V+  
Sbjct: 312 AFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSGHYPAIDVEASISR-VAPMVISD 370

Query: 360 EHYDVARGVQATLQRYKELKDIIAI 384
            H +  R V+     Y++ +D+I+I
Sbjct: 371 AHLEATRRVKQMYSLYQQNRDLISI 395