Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  160 bits (405), Expect = 8e-44
 Identities = 118/415 (28%), Positives = 206/415 (49%), Gaps = 28/415 (6%)

Query: 4   GKIVQIIGAVVDVEFPQSEVPSVYDALNVVDS---KERLVLEVQQQLGGGVIRAIVMGSS 60
           G++ Q++G ++    P  +V  +    N  ++   +  +V  V+Q     V     +G  
Sbjct: 24  GRVEQVVGTIIRAVVPGVKVGELCILRNPWENWTLRAEVVGFVKQ-----VALLTPLGDL 78

Query: 61  DGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQ 120
            G+     V  TG  +S+PVG   LGR+++ LG+ +D    +     Y ++   P+  ++
Sbjct: 79  QGVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPVYAQPPNPMQR 138

Query: 121 SSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 180
                 +  G++V+D +    +G ++G+F  AG GK+  +  +I   +   + + V A +
Sbjct: 139 RIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCS---ADVCVLALI 195

Query: 181 GERTREGNDFY-HEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239
           GER RE  +F  H++   G          K  +V    +     RL+ A T   +AE FR
Sbjct: 196 GERGREVREFIEHDLGPEG--------RKKAVLVVSTSDRSSMERLKAAYTATAIAEYFR 247

Query: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSIT 299
           D+ R VLL +D++ R+  A  E+    G  P+  G+ P++   +  L ER  ++ KGSIT
Sbjct: 248 DQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDKGSIT 307

Query: 300 SVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQ 359
           ++  V V  DD+T+P    T + LD  +VL+R +AA   YPAID   S SR ++  +V +
Sbjct: 308 ALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMN-AIVDK 366

Query: 360 EHYDVARGVQATLQRYKELKDIIAI----LGMDELSEADKQVVARARKIERFLTQ 410
           EH   A+ ++  L +Y E++ ++ I     G D+  EAD + + R   +  FL Q
Sbjct: 367 EHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDK--EAD-EALDRVAAVNAFLRQ 418