Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., type III secretion system ATPase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  165 bits (417), Expect = 3e-45
 Identities = 120/415 (28%), Positives = 206/415 (49%), Gaps = 28/415 (6%)

Query: 4   GKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVM---GSS 60
           G++ Q++G ++    P  +V  +    N  D        ++ ++ G V    ++   G+ 
Sbjct: 24  GRVEQVVGTIIRAVVPGVKVGELCLLRNPWDD-----WNLRAEVVGFVKHVALLTPLGNL 78

Query: 61  DGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQ 120
            G+     V  TG  +S+PVG   LGR+++ LGD ID    +     Y ++   P+   +
Sbjct: 79  QGISPATEVIPTGEILSIPVGEDLLGRVLDGLGDPIDGGPPLKPRTRYPVYADPPNPMTR 138

Query: 121 SSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 180
                 +  G++V+D +    +G ++G+F  AG GK+  +  +I   +   + + V A +
Sbjct: 139 RIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCS---ADVCVLALI 195

Query: 181 GERTREGNDFY-HEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFR 239
           GER RE  +F  H++   G          K  +V    +     RL+ A T   +AE FR
Sbjct: 196 GERGREVREFIEHDLGPEG--------RKKAVLVVSTSDRSSMERLKAAYTATAIAEYFR 247

Query: 240 DEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKKGSIT 299
           D+ R VLL +D++ R+  A  E+    G  P+  G+ P++   +  L ER  ++ +GSIT
Sbjct: 248 DQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDRGSIT 307

Query: 300 SVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQ 359
           ++  V V  DD+T+P    T + LD  +VL+R +AA   YPAID   S SR ++  +VG+
Sbjct: 308 ALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMN-AIVGK 366

Query: 360 EHYDVARGVQATLQRYKELKDIIAI----LGMDELSEADKQVVARARKIERFLTQ 410
           EH   A+ ++  L +Y E++ ++ I     G D+  EAD   +AR   +  FL Q
Sbjct: 367 EHKGAAQKLRKILAKYAEVELLVQIGEYKKGSDK--EAD-DALARVGAVNAFLRQ 418