Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., ATP synthase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  566 bits (1458), Expect = e-166
 Identities = 295/494 (59%), Positives = 374/494 (75%), Gaps = 30/494 (6%)

Query: 4   GKIVQIIGAVVDVEFPQSE----VPSVYDALNVVDSKER-LVLEVQQQLGGGVIRAIVMG 58
           G I Q+IG VVDV F  ++    +PS++DAL +     + LV+EVQQ +G   +R + M 
Sbjct: 6   GHISQVIGPVVDVYFEGTDAELMLPSIHDALEIKRPNGKILVVEVQQHIGENTVRTVAMD 65

Query: 59  SSDGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYE 118
           S+DGL+RGM V  TG PI++P+G +  GR+MNV+GD+ID    +     YSIHR  P +E
Sbjct: 66  STDGLQRGMKVYPTGGPITMPIGEQIKGRLMNVVGDSIDGMKSLDRTGAYSIHRDPPKFE 125

Query: 119 EQSSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFA 178
           + ++  E+L TG+KVIDL+ P+AKGGKIGLFGGAGVGKTV + ELINNIA +H+G SVFA
Sbjct: 126 DLTTVQEVLFTGIKVIDLLEPYAKGGKIGLFGGAGVGKTVLIQELINNIAKKHNGFSVFA 185

Query: 179 GVGERTREGNDFYHEMQEAGV--------------------VNVEQPELSKVAMVYGQMN 218
           GVGERTREGND   EM E+GV                    V+  + E S+V++++GQMN
Sbjct: 186 GVGERTREGNDLLREMIESGVIRYGEAFKESMEKGDWDLSKVDYNELEKSQVSLIFGQMN 245

Query: 219 EPPGNRLRVALTGLTMAEKFRDEG-----RDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 273
           EPPG R  VAL+GLT+AE FRD G     RD+L FIDNI+R+T AG+EVSALLGRMPSAV
Sbjct: 246 EPPGARASVALSGLTVAESFRDAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAV 305

Query: 274 GYQPTLAEEMGVLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNI 333
           GYQPTLA EMG +QERITST+KGSITSVQAVYVPADDLTDP+PATTF+HLDAT VL+R I
Sbjct: 306 GYQPTLATEMGAMQERITSTRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKI 365

Query: 334 AAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDIIAILGMDELSEA 393
             +G+YPA+DPL STSR LDP +VGQEHYDVA+ V+  LQR KEL+DII+ILGM+ELSE 
Sbjct: 366 TELGIYPAVDPLASTSRILDPHIVGQEHYDVAQRVKQILQRNKELQDIISILGMEELSEE 425

Query: 394 DKQVVARARKIERFLTQPYHVAEVFTGDPGVYVPLKETLRGFKGLLAGDYDDIPEQAFMY 453
           DK VV RAR+++RFL+QP+ VAE FTG PGV V +++T++GF+ +L G+ D++PEQAF+ 
Sbjct: 426 DKLVVNRARRVQRFLSQPFAVAEQFTGVPGVMVGIEDTIKGFRMILDGEVDNLPEQAFLN 485

Query: 454 CGTIDDAIENAKKL 467
            GTI++AIE  KKL
Sbjct: 486 VGTIEEAIEKGKKL 499