Pairwise Alignments

Query, 467 a.a., ATP synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  155 bits (391), Expect = 3e-42
 Identities = 111/386 (28%), Positives = 195/386 (50%), Gaps = 17/386 (4%)

Query: 1   MATGKIVQIIGAVVDVEFPQSEVPSVYDALNVVDSKERLVLEVQQQLGGGVIRAIVMGSS 60
           +A+G++V+++G  ++    ++ V S+     +       V+    +L    +  + +   
Sbjct: 25  VASGQLVRVVGLTLEASGCRAPVGSLCSIETMAGELIAEVVGFDDEL----LYLMPIEEL 80

Query: 61  DGLRRGMTVQNTGAPISVPVGTKTLGRIMNVLGDAIDERGDIGAEEVYSIHRPAPSYEEQ 120
            G+  G  V   G    + VG   LGR+++  G  +D  G +  E+    H  A +   +
Sbjct: 81  RGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLGALSTEQQAPRHSNAINPLSR 140

Query: 121 SSATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGV 180
            + TE L+ GV+ I+ +    KG ++GLF G+GVGK+V +  +        + + V   V
Sbjct: 141 RAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTT---ADIIVVGLV 197

Query: 181 GERTREGNDFYHEMQEAGVVNVEQPELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRD 240
           GER RE  +F  E+       + +   ++  +V    +  P  RLR   T   +AE FRD
Sbjct: 198 GERGREVKEFIEEI-------LGEKGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRD 250

Query: 241 EGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITS--TKKGSI 298
            G +VLL +D++ RY  A  E++  +G  P+  GY P++  ++  L ER  +    +GSI
Sbjct: 251 LGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSI 310

Query: 299 TSVQAVYVPADDLTDPSPATTFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVG 358
           T+   V    DD  DP    + A LD  +VL+R++A  G YPAID ++++  ++ P+V+ 
Sbjct: 311 TAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAID-IEASISRVAPMVIS 369

Query: 359 QEHYDVARGVQATLQRYKELKDIIAI 384
            EH +  R V+ T   Y++ KD+I+I
Sbjct: 370 NEHLEAMRRVKQTYSLYQQNKDLISI 395