Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  185 bits (470), Expect = 2e-51
 Identities = 118/394 (29%), Positives = 198/394 (50%), Gaps = 7/394 (1%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           ++ L ALS  G +A D YLPAF  M TAF T  + I L+L  + +G+++GQL +G  +D+
Sbjct: 6   ILILGALSAFGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADR 65

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
           FG R  L+ G+ +FTLAS   A++ ++  L+  RF+QA+G CA  VI +A+V  +  +  
Sbjct: 66  FGRRIPLLTGVGLFTLASLACAYAPSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVG 125

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNE---- 183
           S ++F+ +M ++ L+P LAP LG LL +  GW SIF+ LTL   +   +  L   E    
Sbjct: 126 SAKVFSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTLFSALASTAVALWLPESLPD 185

Query: 184 -IAEPKTTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQL-GYQARDIG 241
            +     +   +    LL    +LG+ +    A A  FAY+ G P +  +L G  A   G
Sbjct: 186 YVPRQPLSGALRQYGRLLTDAVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHFG 245

Query: 242 LSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILA 301
             F      F++   +  + + K G   +L + + ++  +   +   S    + +WP+L 
Sbjct: 246 WLFGTNAAGFILVAQVNARLLSKRGPAFLLSRAVWVYLGAGLSLLAVSSLQPAQLWPLLV 305

Query: 302 PFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPV 361
           P  +   + G + P     A++       +A+ +   LQ SV++ +++LVAA+       
Sbjct: 306 PLFICIASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAASLVAALHDGTAVP 365

Query: 362 TGIAIVLCTGGLWLGYVLSNRTLREQFTTPDNSR 395
             + I LC G L +G  +  R L+        SR
Sbjct: 366 MALVISLC-GLLVVGAAMLTRRLQNARALAQASR 398