Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., MFS transporter from Xanthomonas campestris pv. campestris strain 8004

 Score = 97.8 bits (242), Expect = 5e-25
 Identities = 81/359 (22%), Positives = 159/359 (44%), Gaps = 15/359 (4%)

Query: 11  LSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGH 70
           L+ L+M G  + D   PAF  +  + A     I  +++V+L+   L  +  G  SD +G 
Sbjct: 15  LAGLAMFGPFSIDTIFPAFSQLSRSLAVDEVAIQQTISVYLLAYGLMSIAHGPLSDAWGR 74

Query: 71  RNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQ 130
           +  ++ GL++F   + G A S  +  LL  R +Q +      ++ +A++   +    +Q+
Sbjct: 75  KRVILGGLVLFIAGTIGCALSRDLPTLLAFRALQGLSAGVGMIVGRAVIRDLFQGHDAQR 134

Query: 131 LFATIMPLVALSPALAPQL-GVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEPKT 189
           L + +  +  ++PA+AP + G +L    GW  IF  L + G+VL+++T     E   P  
Sbjct: 135 LMSQVSMIFGIAPAIAPIIGGWILLSGAGWPLIFWFLAVFGLVLLIATVTWLPE-THPVE 193

Query: 190 TSIAQDIKGLLKSKTYLGNVMMFACASAA-------FFAYLTGMPE-IMAQLGYQARDIG 241
                 ++ LL     +G    F   +AA        F Y+   P  +M  L     D  
Sbjct: 194 ARTPLQLRRLLHDYVRIGFNPRFQRLAAAGAFNFAGIFLYIASAPVLVMRHLHLGEGDFA 253

Query: 242 LSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSI---WP 298
             FIP      +G +L  +   +  D +   ++  ++   AA++ +     ++ I   W 
Sbjct: 254 WLFIPTIGGMTLGSFLSGRMAGRM-DPVRQVRIGFIYCGVAALVNLGYTLAVAQISLPWA 312

Query: 299 ILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQ 357
           +L P  L  +    ++PI+    L    Q    A+ LQ   Q+  +++ + +++ + S+
Sbjct: 313 VL-PIFLAGLGMALIFPILALAVLDMYPQQRGLASSLQAFTQLMTNTVVAGVLSPLLSE 370