Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Drug resistance transporter Bcr/CflA subfamily from Pseudomonas syringae pv. syringae B728a

 Score =  180 bits (457), Expect = 6e-50
 Identities = 115/387 (29%), Positives = 202/387 (52%), Gaps = 11/387 (2%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           ++ L +LS  G +A D YLP F  M + F T  + + L+L  + +G++LGQL +G  +D+
Sbjct: 6   ILILGSLSAFGPLAIDFYLPGFPAMASYFGTDEKHVQLTLAAYFLGLSLGQLAYGPVADR 65

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
           FG R  L+ G+ +F LAS   AF+ ++  L+  RF+QA+G CA  V+ +A+V  +  +  
Sbjct: 66  FGRRIPLLVGVTLFMLASVACAFAPSLEWLIAARFVQALGGCAGMVLSRAIVSDKCNAVE 125

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLM--GIVLVVSTGLQTNEIA 185
           S ++F+ +M ++ L+P LAP LG +L   FGW SIF++L L     +  V+ GL  +  A
Sbjct: 126 SAKVFSQLMLVMGLAPILAPMLGGVLVSTFGWQSIFVSLALFSGACLAAVALGLPESMPA 185

Query: 186 ----EPKTTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQL-GYQARDI 240
               +P + ++ Q +  L K   ++G+ +    A A  FAY+ G P +  +L G  A   
Sbjct: 186 TTPRQPLSGALGQYL-NLFKDGVFIGHALTGGIAMAGMFAYVAGSPFVFIKLYGVPAEHY 244

Query: 241 GLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPIL 300
           G  F      F++   +  + ++K G   +L + + ++  +  ++   S     ++WP+L
Sbjct: 245 GWLFGMNAAGFILVAQINARILRKTGPAFLLSRTVWIYLAAGLVLLAISGLRTEALWPLL 304

Query: 301 APFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQP 360
            P  +   + G + P     A++       +A+ L   LQ SV++++++LV  +      
Sbjct: 305 VPLFICVASLGCIIPNASACAMNGQWARAGSASALLGCLQFSVAAVAASLVGVLHDGTAT 364

Query: 361 VTGIAIVLCTGGLWLGYVLSNRTLREQ 387
              + I LC G L +G  LS  T R Q
Sbjct: 365 PMALVISLC-GVLTVG--LSVLTRRAQ 388