Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  117 bits (294), Expect = 5e-31
 Identities = 91/384 (23%), Positives = 178/384 (46%), Gaps = 19/384 (4%)

Query: 14  LSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNT 73
           L  LG I+  +Y PA   +  AFA+    I ++L+++  G A  QL+ G  SD  G R T
Sbjct: 17  LVALGPISMALYTPAMPELVRAFASSEAAIKMTLSLYFGGFAFAQLVSGTLSDVIGRRRT 76

Query: 74  LIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFA 133
            +  + ++   S   AF+ ++  LL  R +Q IG      + +A+V  ++  + + ++  
Sbjct: 77  TLIFMAIYLAGSLMAAFAPSIPVLLAGRLVQGIGASVGMTVARAIVRDQFTGTTAARIMN 136

Query: 134 TIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEPKTTS-- 191
            I  ++AL PA++P LG +    FGW SIFL +    ++      L   E   P  +   
Sbjct: 137 MIGMMLALGPAVSPTLGSIALGLFGWQSIFLLMVGFALMACFIVQLFMAETTTPDRSKGH 196

Query: 192 ---IAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIM-AQLGYQARDIGLSFIPQ 247
              I      L++   ++ + ++ A A  A +A+ T +P ++ +Q+G    + G+  + Q
Sbjct: 197 FRPILAAYGELMRDGRFVSSTLVIAGAVGALYAWATMLPFVLISQVGLTPTEFGIGMLMQ 256

Query: 248 TIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWP----ILAPF 303
           +  F  G    +  ++++  + ++     LF + AA + +A  +T+ ++ P    ++ P 
Sbjct: 257 SGLFFSGTVTMRLMMRRFTPQALVP--AGLFFIGAASLALA--FTMHALEPTFLSVMTPI 312

Query: 304 CLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQAQPVTG 363
            + A     + P ++  A++       TA+ +   +Q+S   L  AL A +     P   
Sbjct: 313 GIYAFGIAFVMPYMMTAAMAPFPHIAGTASAMMGFIQMSAGLLGGALAALV---GVPAMA 369

Query: 364 IAIVLCTGGL--WLGYVLSNRTLR 385
           +  ++ + GL     Y    RT+R
Sbjct: 370 LGTIIPSFGLLSLASYFWYRRTVR 393