Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., multidrug effflux MFS transporter from Rhodopseudomonas palustris CGA009

 Score =  126 bits (316), Expect = 1e-33
 Identities = 90/341 (26%), Positives = 163/341 (47%), Gaps = 17/341 (4%)

Query: 20  IATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDKFGHRNTLIAGLL 79
           IA  +++PA  ++ + F +      +++++++VG+A  QL+ G  SD+FG R  L+ GL 
Sbjct: 37  IALYIFVPALPVLASDFGSDISVAQMTVSLYMVGLACSQLIMGPLSDRFGRRPVLLGGLA 96

Query: 80  VFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSVSQQLFATIMPLV 139
           +   AS G  F+ T+ QL+ LRF+QA+G  +  VI +A++   Y       + + ++ ++
Sbjct: 97  LMVAASIGCIFAQTLPQLIALRFLQALGGASGMVISRAIIRDLYSRDRVGGMLSLVIAVM 156

Query: 140 ALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEPKTTS-----IAQ 194
            ++  L+P  G ++   FGW +IF  +T   IV+  +  L   E +   T +        
Sbjct: 157 MIAQMLSPLAGGVIETAFGWRAIFYAVTAGAIVVAAAITLALPETSRRSTPAAQRGGFGT 216

Query: 195 DIKGLLKSKTYLGNVMMFACASAAFFAYLTGMP-EIMAQLGYQARDIGLSFIPQTIAFMV 253
           D++ L  S+ ++G V+    ASA  F +  G P  ++ Q+G  + + G  F     A+++
Sbjct: 217 DLRSLFGSRAFIGYVLCQVLASAIIFIFAGGGPYVVVTQMGRSSAEYGAWFASSGFAYLM 276

Query: 254 GGYLGKKAVQKYG-DELV-----LKQLIALFTLSAAMIFVASQWTLSSIWPILAPFCLIA 307
           G     K   ++  D L+     L+   AL  L+  ++     W     W +     +I 
Sbjct: 277 GNVFCVKFSPRHSLDRLIWFGLGLQIAGALLNLAWGIL----GWNQVPSW-LFGTHMIIM 331

Query: 308 VANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSS 348
             N A+       A+S   Q+  TA+GL    Q    SL S
Sbjct: 332 FGNAAVMANAAAGAISIRPQAAGTASGLMGFTQFGFGSLCS 372