Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., Bcr/CflA family multidrug efflux MFS transporter from Pseudomonas fluorescens SBW25-INTG

 Score =  296 bits (758), Expect = 7e-85
 Identities = 165/383 (43%), Positives = 239/383 (62%), Gaps = 4/383 (1%)

Query: 1   MKVSFFQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLL 60
           MK SF    YL+ LSMLG++A DMYLPAF  M      G   +  SL++FL G ALGQL+
Sbjct: 1   MKNSFGFTWYLAGLSMLGYLAMDMYLPAFGAMGEHLHIGAGAVGASLSIFLAGFALGQLV 60

Query: 61  WGLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVI 120
           WG  SD+ G +  L+AGL +F L  AG+ +  T  QLL LRF+QAIGVCA AV WQA+VI
Sbjct: 61  WGPLSDRLGRKPVLLAGLSLFVLGCAGMFWVETTPQLLALRFMQAIGVCAAAVSWQALVI 120

Query: 121 KRYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQ 180
            RYP+  +  +FA+IMPL++LSPALAP LG ++ ++FGW +IF  L  + ++L++ T L 
Sbjct: 121 DRYPADKAHCVFASIMPLMSLSPALAPLLGAMVLNHFGWQAIFGVLLGVSLLLLLPT-LF 179

Query: 181 TNEIAEPKTTSIAQDIKG---LLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQLGYQA 237
                +P+    A    G   L  S+ + GNVM+FA  SA+FFA+LT  P I+  +GY  
Sbjct: 180 LRTPPKPRAQEGAPSRLGYGQLFTSRVFTGNVMIFAACSASFFAWLTASPFILGGMGYSP 239

Query: 238 RDIGLSFIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIW 297
            DIGLS++  T+AF+VGGY  + A+Q    + +L  L+  + +S   +++ +  T+ ++ 
Sbjct: 240 NDIGLSYVLPTLAFLVGGYSCRSALQHVQGKTLLPWLLLAYCISMVALYLVATLTVPTLT 299

Query: 298 PILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLSSALVAAMASQ 357
            +L PFCL+A+ NGA YPIVV  AL    ++   AA LQN+LQ+ +  L+S +V+ M  +
Sbjct: 300 TLLIPFCLMALCNGASYPIVVANALMPFAENSGKAAALQNTLQLGLCFLASLIVSWMIDE 359

Query: 358 AQPVTGIAIVLCTGGLWLGYVLS 380
              +T I ++       LGY L+
Sbjct: 360 PLLITVIVMLATAPLAVLGYWLA 382