Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., putative bicyclomycin resistance protein from Phaeobacter inhibens DSM 17395

 Score =  118 bits (296), Expect = 3e-31
 Identities = 103/387 (26%), Positives = 174/387 (44%), Gaps = 11/387 (2%)

Query: 8   LVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLWGLASDK 67
           L+ LS LS L   A +++LP+   M   F      + LS+ ++L   A+ Q+  G  SDK
Sbjct: 20  LILLSGLSAL---AMNIFLPSLPGMARYFDADYSLMQLSVALYLAVSAIVQIFVGPISDK 76

Query: 68  FGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIKRYPSSV 127
            G R  ++ G+ +F LA+ G  ++ +    LL R  QAI V +  V+ +A V   Y S  
Sbjct: 77  LGRRPVILWGVALFLLATLGCLYAPSAEIFLLFRMCQAI-VASAMVLSRAAVRDIYDSDQ 135

Query: 128 SQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQTNEIAEP 187
           +  +   +   +A+ P + P +G  L +  GW + F  L  +G        L   E A  
Sbjct: 136 AASMIGYVTMGMAVVPMIGPMIGGALEETIGWKANFWLLMALGAGTFAIAYLDLGETARK 195

Query: 188 K-TTSIAQ--DIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQL-GYQARDIGLS 243
              T +AQ  +   LL+S  + G  +    +S AFFAYL G P +  Q+ G  A  +G+ 
Sbjct: 196 SGKTLMAQFREYPELLRSPRFWGYSLASGLSSGAFFAYLGGAPFMGTQVYGLSAAQLGVY 255

Query: 244 FIPQTIAFMVGGYLGKKAVQKYGDELVLKQLIALFTLSAAMIFVASQWTLSSIWPILAPF 303
           F    + + VG +L  +   + G   ++     +  +  A+  V +     S++      
Sbjct: 256 FASPAVGYFVGNFLSGRYSVRIGLNQMVLWGCLINGVGVALSLVLALLGADSVYSFFGFM 315

Query: 304 CLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISV-SSLSSALVAAMASQAQPVT 362
             + + NG   P     A+S       TA+GL  ++ I V + LS+     +   + PV 
Sbjct: 316 TFVGLGNGMAIPNATAGAISVRPHLAGTASGLAGAIMIGVGAGLSAYAGYLLVPGSTPVP 375

Query: 363 GIAIVLCTGGLWLGYVLSNRTLREQFT 389
            +AI+L  G   LG++     +R + T
Sbjct: 376 LLAIML--GTAVLGFISIRVVIRREKT 400