Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., Bcr/CflA family drug resistance efflux transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score =  149 bits (375), Expect = 2e-40
 Identities = 103/371 (27%), Positives = 188/371 (50%), Gaps = 21/371 (5%)

Query: 2   KVSFFQLVYLSALSMLGFIATDMYLPAFKMMETAFATGPEQIALSLTVFLVGMALGQLLW 61
           K  F+ ++ L +L+ LG  + DMYLP F  +    ++    +ALSL+ F +G++ GQLL+
Sbjct: 4   KQHFYLILILGSLAALGPFSIDMYLPGFVDIAKDLSSNESTVALSLSSFFIGISAGQLLY 63

Query: 62  GLASDKFGHRNTLIAGLLVFTLASAGLAFSSTVWQLLLLRFIQAIGVCAPAVIWQAMVIK 121
           G   DKFG +  L  GL ++ L+S      + V QL++LRF+QAIG CA AV   AMV  
Sbjct: 64  GPLLDKFGRKKPLYFGLALYILSSFLCLAVTDVNQLIVLRFVQAIGSCATAVASVAMVRD 123

Query: 122 RYPSSVSQQLFATIMPLVALSPALAPQLGVLLADYFGWHSIFLTLTLMGIVLVVSTGLQT 181
            +    S ++FA++M ++A+SP LAP  G  L    GW  +F+ L LM ++++++T  + 
Sbjct: 124 LFSVEESPKVFASLMLVIAVSPMLAPTAGGYLISALGWKYVFVFLGLMAVLMLLATIFKL 183

Query: 182 NEIAEP------KTTSIAQDIKGLLKSKTYLGNVMMFACASAAFFAYLTGMPEIMAQLGY 235
            E  +P      K   I  +   +LK   +    ++ +   +  FAY++  P++  ++ Y
Sbjct: 184 PESYKPDPNYSLKPKPILTNFFTVLKEPQFYTYALISSITFSGLFAYVSSSPQVFMKI-Y 242

Query: 236 QARDIGLSFIPQTIAFMVGGYLGKKAVQKY------GDELVLKQLIA--LFTLSAAMIFV 287
           +    G  +I    A +   ++G   V            +V   LIA  +F+L   ++F 
Sbjct: 243 EVSKTGYGWI---FALLSVSFIGSSQVNSLILKWFSSKNIVTYALIAQCIFSL-IFLVFA 298

Query: 288 ASQWTLSSIWPILAPFCLIAVANGAMYPIVVNRALSSAKQSPATAAGLQNSLQISVSSLS 347
            + W   +++  +    L     G + P     +L+   ++  +A+ L  +LQ+ + +L+
Sbjct: 299 LNNWL--NLYSTIGFIALFLACLGLINPNAAALSLAPFTKNAGSASALMGALQMGLGALA 356

Query: 348 SALVAAMASQA 358
           S +V+  +  +
Sbjct: 357 SVMVSLFSEHS 367